Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01404 ATGACGCGCAAGCCTAAACCCAAAAGCGGCAGCTcctctgcctcggccaccgctactgcctccgcctTCTTCAAACCTGGCACTAAGGTGGAAGTCAGTTCCGAGGATGACGGCTTCCGCGGCTCCTGGTATTCCGGCACCATCATTCGCCGAATCGCTTCCGATAGGTTCTTGGTCCAGTACGACAATCTGATGGCCGACGATAATAGTTCAGAGCATCTCAGAGAACCCCTCGGTCTCCGCCACCTCCGGCCACTTCTTCCGACTGAGACCGCCCCTGAGTTCAAGTTTGGTGACGAAGTTGACGCCTACCACAATGATGGATGGTGGGAGGGTCACATAACCGAAGAATTGGAAAACGAGAACTTTGCAGTGTATTTCAGAGCATCCAAGGAGCAATTGGTGTTTCCCAAAGATAAACTCAGGCTCCACCGTGAGTGGTTCAATCATGAATGGGACCCACCGCTACAACCACCACCGCAACAGGATAAAAGTGAATTGGATGAAGTGTCGTTGACACCCATTGTGAAGTCTGTTGAAACTGTGAAGTCTGTTGAGACTGTGAAGGAGGAGGAGTATAGGGTAGGGACTGCAGTTGAAGTTAGCAGTGACGAAGATGGGTTCAGTGGGGCTTGGTTTGCTGCCACTATTGTTGAGGCTAAGGGAAAGGACAAGTTTGTTGTTGAGTACCAGAGCCTTTTGGTTGATGATGATTCCCATCTTTTGAGAGAGGAGATTGATGTCATGCACTTAAGGCCTCAACCGCCGGACACTGCTGCTCAATTCAGTCTTCTTGATGAAGTTGATGCTCTCTACAATGATGGCTGGTGGGTTGGCGTGGTTTCTAAAGTTCTTGCTGATTCTAGGTACATAGTTTACTTCAGGTCTTCTAAGGAAGAGCTAGAGTTTCAGCACTCTCAGTTGAGGCTGCACCAGGACTGGATTGGTGGCAAATGGGTCATGCCCTGTAAGGCGTTGAAGTTGTGA 987 0.4772 MTRKPKPKSGSSSASATATASAFFKPGTKVEVSSEDDGFRGSWYSGTIIRRIASDRFLVQYDNLMADDNSSEHLREPLGLRHLRPLLPTETAPEFKFGDEVDAYHNDGWWEGHITEELENENFAVYFRASKEQLVFPKDKLRLHREWFNHEWDPPLQPPPQQDKSELDEVSLTPIVKSVETVKSVETVKEEEYRVGTAVEVSSDEDGFSGAWFAATIVEAKGKDKFVVEYQSLLVDDDSHLLREEIDVMHLRPQPPDTAAQFSLLDEVDALYNDGWWVGVVSKVLADSRYIVYFRSSKEELEFQHSQLRLHQDWIGGKWVMPCKALKL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01404 328 Pfam Agenet domain 196 256 IPR008395 -
Cca02g01404 328 Pfam Agenet domain 27 88 IPR008395 -
Cca02g01404 328 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 19 321 - -
Cca02g01404 328 SMART agenet_At_2 260 316 IPR014002 -
Cca02g01404 328 SMART agenet_At_2 191 259 IPR014002 -
Cca02g01404 328 SMART agenet_At_2 22 91 IPR014002 -
Cca02g01404 328 SMART agenet_At_2 93 149 IPR014002 -
Cca02g01404 328 MobiDBLite consensus disorder prediction 1 20 - -
Cca02g01404 328 PANTHER AGENET-LIKE DOMAIN, AGENET DOMAIN, PLANT TYPE-RELATED 19 321 - -
Cca02g01404 328 Gene3D - 183 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01404 Cca-Chr2 32535190 32540501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01404 203 314 PHD Transcription Factor Family AT5G58610 29.851 8.50e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01404 - - gmx:100805605 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01404 02 32535190 32540501 Cca02g01404 02 32535190 32540501 ECH