Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01397 ATGGCGGGTAGTGTTACTCCAGTCATGGCCATGGTTATTGTACAATTGGGCTATGCAGGGATGAATATTACCTCAAAGCTTGCAATACAATCTGGCATGCACCCTCTTGTCCTTGTTACTTATCGCCAAATTTTTGCAACTATTGCCCTTGCTCCATTCGCTTATTGCTTAGAGCGGAATACGGTTCCCCGAATGACAAAGCGCATTGCGTTCCAGATATTATTATCTTCCTTGACAGGAGTATCAGGAAATCAGATACTTTATTTCGTGGGGCTCAAATATTCAACCCCTACAATTGCATGTGCACTAAACAACATGCTACCAGCATTCACTTTTGTTCTTGCAGTCCTTTTCAGACAAGAGTATTTGAGAATCAAGACATTGGGAGGGGTAGCGAAGGCGTTAGGGACAGTCCTTAGTGTTGGTGGAGCGATTCTTTTGTCATTTTACCATGGAAAAGTGCTTGGTTTTGGTGAATCACGTATTCATTGGAGATATGCAGATAAAATGGAAAGAGAAGCCTCTTCTAGGAGTGAATCAAATTTGCTTCTGGGCCCTGTTGCTGTAATTGGCAGTGCTCTTGTTTGGGCAGTATGGTTCATAGTTCAAGCAAACATGAGCAAGAGCTATCCAGCTCCTTATACTAGCACTTTCTACATGTGTTTCATCGCAAGCATTCAGTGTATGGCCATAGCCTTGTCTGTGGAACACAGGGCCTCAGCTTGGTCACTCCACAGTACTATAAGACTCACCTCTTCACTTTATGCGGGAACTATTTGTTCTGCACTAGCGTACGTTCTCCTTTCGTGGACCATTCAGAGAAAAGGTCCTCTCTACGTGTCTGTGTTCTCCCCTTTGCTTCTTGTCATCATTGCTGTTCTAAGTTGGGCTCTTCTTCATGAGGAATTATACGTTGGCACTGCCATAGGGTCTGTGCTGATAGTGTTCGGGCTCTATTTTGTATTGTGGGGAAAGAACAAAGAGATGAATAAGACAAACGCAGTTCAAGAGAGCGTAACGGAGGTGATCAAGGATAGCGAGAAGGGCCTGGAATTGCAACCCTATGATCCTTTCAACCGTAACGGTAACGGAATCCATCATGGTGCTAATTGA 1113 0.4412 MAGSVTPVMAMVIVQLGYAGMNITSKLAIQSGMHPLVLVTYRQIFATIALAPFAYCLERNTVPRMTKRIAFQILLSSLTGVSGNQILYFVGLKYSTPTIACALNNMLPAFTFVLAVLFRQEYLRIKTLGGVAKALGTVLSVGGAILLSFYHGKVLGFGESRIHWRYADKMEREASSRSESNLLLGPVAVIGSALVWAVWFIVQANMSKSYPAPYTSTFYMCFIASIQCMAIALSVEHRASAWSLHSTIRLTSSLYAGTICSALAYVLLSWTIQRKGPLYVSVFSPLLLVIIAVLSWALLHEELYVGTAIGSVLIVFGLYFVLWGKNKEMNKTNAVQESVTEVIKDSEKGLELQPYDPFNRNGNGIHHGAN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01397 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 327 - -
Cca02g01397 370 PANTHER WAT1-RELATED PROTEIN 1 339 - -
Cca02g01397 370 PANTHER WAT1-RELATED PROTEIN 1 339 IPR030184 GO:0016021|GO:0022857
Cca02g01397 370 Pfam EamA-like transporter family 8 148 IPR000620 GO:0016020|GO:0016021
Cca02g01397 370 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Cca02g01397 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01397 Cca-Chr2 32474961 32478461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01397 7 364 Nodulin-like Gene Family AT1G09380 55.556 8.98e-144 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01397 - - gmx:100781298 586.645