Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01367 ATGGGCAACCTCTTCTGCCTTCGCATTGTTGCAGCACTTGTTTTTAGCTTCTGGGTTGATGCCTTTTCAGCCTACCATTATCACCACTTCAATGTAACCGACTTCTCTTTAATGGAGCCTCAAGAGCAAGCTTCCTCCTCCCTCTTTGCCAGGACTCCTCTCATGGTGGCTCTCACCCTTATTCAAGCTGCTGCTGCCAAAGGAGCAGTTTGCTTAGATGGAACATTGCCTGGCTATCATTTGCATCGAGGGTATGGATCAGGAGCAAACAGCTGGCTTGTTAATTTAGAGGGAGGTGGGTGGTGTAATGACGTTAGAACGTGTGTTTATCGCAAGAAAACACGGCGTGGGTCATCAACATTCATGGAAAAACAGATACCTTTCACGGGAATATTAAGCAATAATGCTGAAGATAATCCAGATTTTTTCAACTGGAACAGAGTGAAAATTCGTTATTGTGATGGTGCCTCTTTTGCTGGGGATGCTGAAGATAAGGCTGCGCAACTGCAATTTAGAGGACAACGTATTTGGTTGGCTGCAATTGATGATTTGATATCAAAGGGAATGCGTTTTGCGAAGCAGGCTCTTCTTTCTGGATGCTCTGCTGGTGGTCTAGCTACTATTATACACTGTGATGAATTCCGAGGTTTTTTCCCACAGACTACCAAAGTGAAGTGTCTCAGTGATGCTGGGTTATTTCTTGATTCGATGGATGTGTCTAGGGGACGTACCCTAAGGAATTTTTTCAGTGGTGTTGTAGGGATGCAGGGAGTGCAGAAGAATCTTCCGCGCTTTTGTACTAATCACCTTGATGCCACTTCGTGTTTCTTCCCTCAGAACTTGATTGCCGGTATTAGAACCCCGCTATTCATTCTTAATACTGCCTATGATTCATGGCAGATCCAATCAAGCTTAGCTCCTTCATCCGCAGATCCCCATGGCTTTTGGCATGATTGTAGATTAAATCATGCTAAATGTACTACTTCACAAATCCAATTTTTGCAAGGATTCAGGAATCAAATGCTGAATGCTATTAGAGGCTTCTCAAGATCACGTCAGAATGGATTGTTCATAAATTCATGTTTTGCTCACTGCCAATCTGAGAGGCAGGATACATGGTTTGCTGACAATTCTCCTGTCCTTGGAAACAAGGCAATTGCTCTGGCTGTTGGAGACTGGTATTTCGACCGGGCAGTTGTTAAGGCCATTGATTGTCCTTACCCTTGTGACAATACATGTCACCATCTTGTCTTCAGATGA 1260 0.4397 MGNLFCLRIVAALVFSFWVDAFSAYHYHHFNVTDFSLMEPQEQASSSLFARTPLMVALTLIQAAAAKGAVCLDGTLPGYHLHRGYGSGANSWLVNLEGGGWCNDVRTCVYRKKTRRGSSTFMEKQIPFTGILSNNAEDNPDFFNWNRVKIRYCDGASFAGDAEDKAAQLQFRGQRIWLAAIDDLISKGMRFAKQALLSGCSAGGLATIIHCDEFRGFFPQTTKVKCLSDAGLFLDSMDVSRGRTLRNFFSGVVGMQGVQKNLPRFCTNHLDATSCFFPQNLIAGIRTPLFILNTAYDSWQIQSSLAPSSADPHGFWHDCRLNHAKCTTSQIQFLQGFRNQMLNAIRGFSRSRQNGLFINSCFAHCQSERQDTWFADNSPVLGNKAIALAVGDWYFDRAVVKAIDCPYPCDNTCHHLVFR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01367 419 Pfam Pectinacetylesterase 52 398 IPR004963 GO:0016787
Cca02g01367 419 PANTHER PECTIN ACETYLESTERASE 7 418 - -
Cca02g01367 419 PANTHER NOTUM-RELATED 7 418 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01367 Cca-Chr2 32129817 32134841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01367 43 419 Carbohydrate Esterase AT1G57590 70.370 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01367 K19882 - gmx:100810716 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02708 03 48391194 48395333 Cca02g01367 02 32129817 32134841 ECH
Cca02g01367 02 32129817 32134841 Cca03g02708 03 48391194 48395333 ECH
Cca02g01367 02 32129817 32134841 Cca02g01367 02 32129817 32134841 ECH
Cca03g02690 03 48185652 48190189 Cca02g01367 02 32129817 32134841 ECH
Cca11g02607 11 53313199 53319663 Cca02g01367 02 32129817 32134841 ECH
Cca03g02690 03 48185652 48190189 Cca02g01367 02 32129817 32134841 PCT