Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01360 ATGGTTCCACTCTTGCTGTACATCATCGCTTTCTTCTGCACCTGCGGAGCTATTGCCTTGGCCTTGCTGCACATTTACAGGCACCTCCTTAATTACACCGAACCCACCTATCAACGCTTCATTGTTCGGATCGTTTTTATGGTCCCGGTTTATGCGTTGATGTCATTCTTGTCCCTTGTTCTACCAGAGTGTTCAATCTATTTTAATTCAATCCGGGAAATCTATGAAGCTTGGGTTATTTATAATTTCTTATCGCTGTGTCTCGAATGGGTTGGTGGTCCTGGAGCAGTGGTCCTAAGTTTAAGCGGACGGATTCTGAAGCCATCATTGTTTCTAATGACTTGTTGCTTACCTCCTCTAGCGCTTGATGGACGTTTCATACGTAAATGCAAGCAAGGGTGTTTGCAGTTTGTGATTTTGAAGCCCATTTTAGTCGTTGTTACACTTATACTTTATGCGAAGGGGAAATATAAGGATGGGAATTTCAGTCCAAAGCAATCATACTTGTATCTTACAATCATCTATACGTTCTCGTACACAATGGCTCTCTATGCTCTTGCCTTGTTTTATGTGGCATGCAAGGATCTGCTTCAACCATTCAATCCAGTTCCGAAGTTTATTATAATAAAATCTGTTGTATTCCTAACTTATTGGCAGGGTGTCTTGGTATTCCTTGCTGCAAAGTCGGAATTAGTCAAGGATGCAGATGAAGCTGCTCTACTTCAAGATTTTTTTATTTGCGTTGAGATGCTACTTGCTGCTGTTGGCCACTTCTATGCATTTCCATACAAGGAATATGCCGGGGCTAACATTGGTGTATCCCGTGGGTTTTCAGCTAGCCTTGCTCATGCTTTGAAGTTAAATGACTTTTACCATGATACCGTCCACCAGTTTGCACCAACATACCATGATTATGTTCTCTACAACCATGGTGAAGGTGAAGAGGGAACTAGGAAGTATAGGTCACGGACTTTTGTTCCAATTGGCCCAGAGATGGAGAACGTGAGAAGAAACAAGCATTTGTTTGGAAACAAGGTGGATGACATACAGCTCTCAAGTTTTTCCTCTAGCAGTAGCACTCCCTCAAATTCTGGCCCCATCTCTGATATTTCACATTCTGGTGGTATGAAATCTTCCTTACTCGTGGATGTGTCAAATTCTTTATCTGTGCCATACGATATGACACTTATCGACTTGGATTCATCCAATTATCCTGAAAAAGTCCCAGCAGCTGATAAAGTTGGTACTAGGTAA 1254 0.4195 MVPLLLYIIAFFCTCGAIALALLHIYRHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLVLPECSIYFNSIREIYEAWVIYNFLSLCLEWVGGPGAVVLSLSGRILKPSLFLMTCCLPPLALDGRFIRKCKQGCLQFVILKPILVVVTLILYAKGKYKDGNFSPKQSYLYLTIIYTFSYTMALYALALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSELVKDADEAALLQDFFICVEMLLAAVGHFYAFPYKEYAGANIGVSRGFSASLAHALKLNDFYHDTVHQFAPTYHDYVLYNHGEGEEGTRKYRSRTFVPIGPEMENVRRNKHLFGNKVDDIQLSSFSSSSSTPSNSGPISDISHSGGMKSSLLVDVSNSLSVPYDMTLIDLDSSNYPEKVPAADKVGTR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01360 417 PANTHER BNAA05G31380D PROTEIN 4 414 - -
Cca02g01360 417 Pfam Organic solute transporter Ostalpha 7 266 IPR005178 -
Cca02g01360 417 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 4 414 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01360 Cca-Chr2 32060385 32064908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01360 - - gmx:100789701 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02697 03 48257802 48269386 Cca02g01360 02 32060385 32064908 PCT
Cca02g01360 02 32060385 32064908 Cca03g02441 03 45460248 45473631 PCT