Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01348 ATGACAATGAAGCTGGTTTTGGTGTTCGTTGTTCAACTTGCATGCTTTGTTTCTGGGATCTTGTCCTTCGGATCTGAGACACTCTCTCCGCTTTCTTTCTTAGACAACAATGCCGTTTCAACAAGGCATTCCTCCTCACCTCAACCTCAACCTCTTATGGTCGACCTCACTCTCATTCAAGGAGCTGATTCTAAAGGAGCTGTCTGTTTGGATGGAACATTGCCTGGTTACCATTTGGATCGTGGATTTGGATCTGGTGCAGATAGTTGGCTTATTCATTTGGAGGGAGGAGGATGGTGTAACACCATTAGAAACTGTGTCTATAGAAAAAATACTCGCCGTGGTTCCTCAAAATACATGGAAAGTCAAATACCATTCACGGGAATATTGAGCAACAAACCTGAAGAAAATCCTGATTTCTTTAACTGGAACAGAGTTAAATTACGATACTGTGATGGGGCGTCTTTCAGTGGAGATAGTGAAGATGAGTCTGCACAGCTTCAATTTCGAGGACAAAAAATATGGCTGGCTGCAATGGAGGAATTAATGTCCAAAGGAATGCAGAAAGCTGACCAGGCACTTCTCTCTGGATGCTCTGCGGGCGGTCTGGCATCCATAATACATTGTGATGAGTTCCGGAGCTTGTTTCCAAAATCTTCCAAAGTGAAATGTTTGAGTGATGCAGGTTTTTTTCTTGATGCAATTGATGTATCTGGTGGACGCACACTAAGGAATCTGTTTGGAGGTGTGGTTCAGTTACAGGAGGTGCAAAAAAATCTGCCAAAAAGTTGTCTCGACCAATTGGATCCAACTTCGTGCTTCTTCCCTCAGAATATGGTCGAACATATTGAGACCCCATTGTTTCTACTCAACGCAGCTTATGATGTGTGGCAGGTCCAAGCCAGTTTAGCCCCACCTTCAGCTGATCCCCTGGGCTCTTGGAATGACTGCAAATCAAACCATGCAAATTGTAGCTTATCTCAACTTCAGTTCCTCCAAGACTTTAGAAATCAAATGCTGAGTGACATTAAAGACTTCTCAAGGTCATCTCAAACTGGACTATTCATAAATTCTTGTTTTGCTCATTGTCAATCTGAGAGACAAGAGACATGGTTTGCTGATGACTCTCCCCTTATCGAGGACAAGCCAATTGCAGTTGCTGTTGGAGACTGGTATTTTGATCGAGAATCTGTCAAAGCTATTGACTGTGCTTACCCGTGTGACAACAGCTGCCATAATCTGGTGTTTAACTTTAAGTGA 1260 0.431 MTMKLVLVFVVQLACFVSGILSFGSETLSPLSFLDNNAVSTRHSSSPQPQPLMVDLTLIQGADSKGAVCLDGTLPGYHLDRGFGSGADSWLIHLEGGGWCNTIRNCVYRKNTRRGSSKYMESQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDSEDESAQLQFRGQKIWLAAMEELMSKGMQKADQALLSGCSAGGLASIIHCDEFRSLFPKSSKVKCLSDAGFFLDAIDVSGGRTLRNLFGGVVQLQEVQKNLPKSCLDQLDPTSCFFPQNMVEHIETPLFLLNAAYDVWQVQASLAPPSADPLGSWNDCKSNHANCSLSQLQFLQDFRNQMLSDIKDFSRSSQTGLFINSCFAHCQSERQETWFADDSPLIEDKPIAVAVGDWYFDRESVKAIDCAYPCDNSCHNLVFNFK 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01348 419 PANTHER PECTIN ACETYLESTERASE 2 417 - -
Cca02g01348 419 Pfam Pectinacetylesterase 49 397 IPR004963 GO:0016787
Cca02g01348 419 PANTHER NOTUM-RELATED 2 417 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01348 Cca-Chr2 31969034 31973931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01348 2 418 Carbohydrate Esterase AT3G62060 64.789 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01348 K19882 - gmx:100811787 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02708 03 48391194 48395333 Cca02g01348 02 31969034 31973931 PCT