Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01321 ATGCAGGGTTGTGATGGTTCAGTATTGTTAGAATCCACACCGGGAAATCCATCAGAGAGAGAACACCCAGCTAACAACCCAAGTTTACGAGGCTTCGAAGTCATCGAAGAGGCTAAGGCCCAAATAGAAGCAGAGTGTCCTCACACTGTGTCGTGCGCAGACATTCTTGCTTTTGCTGCTCGAGACAGCGCTAACAAAGTTGGGGGCATAAAGTACGAGGTTCCAGCTGGACGCAGAGACGGTCGTGTCTCTATAAGAGACGAAGCGTCACAACTGCCTCGTCCAACCTTTAACGCAAAGGAGCTTATTAGTAACTTCGAACAAAAAGGGTTGTCTGCAGATGAAATGGTAACACTCTCTGGAGCGCATTCTGTTGGTGTCTCACACTGTTCCTCCTTCTCCGATCGCTTGTACTCTTCCAATGCTACCTTTGCTCAGGATCCCTCTATGGACCCCAACTTTGCTTCGTCCTTGAAAAACAAGTGTCCACCACGGAGCAATGATGATAACACAGTGGTGCTGGATGCTTCCACCCCGAACCGTTTGGACAACAAGTACTACACGGGACTCAAGAACCATCGTGGTCTGTTGACCTCAGATCAGACGTTGATGACCAGCCCCTCAACGAGGCCAATGGTGCTGACCAATGCAAAACATGCTTCAATTTGGGCACGTAAGTTTGCTAAGGCAATGGTGCATATGGGTTCCATTGATGTGCTAACCGGCTCACAAGGCGAGATCAGGACTCGTTGCAGCGTCCTTAATTAA 768 0.4909 MQGCDGSVLLESTPGNPSEREHPANNPSLRGFEVIEEAKAQIEAECPHTVSCADILAFAARDSANKVGGIKYEVPAGRRDGRVSIRDEASQLPRPTFNAKELISNFEQKGLSADEMVTLSGAHSVGVSHCSSFSDRLYSSNATFAQDPSMDPNFASSLKNKCPPRSNDDNTVVLDASTPNRLDNKYYTGLKNHRGLLTSDQTLMTSPSTRPMVLTNAKHASIWARKFAKAMVHMGSIDVLTGSQGEIRTRCSVLN 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01321 255 CDD secretory_peroxidase 2 253 IPR033905 GO:0004601|GO:0042744
Cca02g01321 255 ProSitePatterns Peroxidases proximal heme-ligand signature. 115 125 IPR019793 -
Cca02g01321 255 PANTHER PEROXIDASE 25-RELATED 2 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01321 255 MobiDBLite consensus disorder prediction 1 23 - -
Cca02g01321 255 Gene3D - 2 255 - -
Cca02g01321 255 ProSiteProfiles Plant heme peroxidase family profile. 1 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g01321 255 PRINTS Haem peroxidase superfamily signature 50 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g01321 255 PRINTS Haem peroxidase superfamily signature 68 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g01321 255 PRINTS Haem peroxidase superfamily signature 115 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g01321 255 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g01321 255 PANTHER PEROXIDASE 2 253 - -
Cca02g01321 255 SUPERFAMILY Heme-dependent peroxidases 2 255 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca02g01321 255 Pfam Peroxidase 2 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g01321 255 MobiDBLite consensus disorder prediction 1 27 - -
Cca02g01321 255 Gene3D Peroxidase, domain 2 93 234 - -
Cca02g01321 255 PRINTS Plant peroxidase signature 30 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01321 255 PRINTS Plant peroxidase signature 49 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01321 255 PRINTS Plant peroxidase signature 68 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01321 255 PRINTS Plant peroxidase signature 114 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01321 255 PRINTS Plant peroxidase signature 173 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01321 255 PRINTS Plant peroxidase signature 189 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01321 255 PRINTS Plant peroxidase signature 229 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01321 Cca-Chr2 31527183 31527950 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01321 1 253 Peroxidase AT3G21770 46.718 4.98e-69 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01321 K00430 - gmx:100813563 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01321 02 31527183 31527950 Cca02g01321 02 31527183 31527950 ECH