Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01300 ATGGAGAAGAAGGAGATGGCTGTGAAGACTGAGGATGCGGTTGGGTCCTCTTCTTTCCCTTGTTATAATTCAAACGTGTATCCATTTTCTAGTGCCTTTGATTTCCCTGAGGTCGAAAAGAACTCTTTAGGGTTTATGGAGTTACTGGGTGTGCAGGACTACAGTCCTCTGCTTGAGTTACCTCAACTTTCAACTTTGTCTGTGCCTCATCACTCCACAGTTAAGCTTGCATCTGATAACTGTTCCGAGGTGTTGAACCAACTACCTGCCACTCCAAACTCTTCTTCCATTTCATCTGCATCCAGTGATGCAGTCAATGATGAACAGAATAAGACTCTAGACCaagcagaagaagatgaagaagaagaagaaggacagcaaaagactaagaaACAGTTGAAGCCGAAGAAGACAAATCAGAAGAGACAGAGAGAACCAAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAGGCCGTGAAAAACAGCCCCTTTCCCAGGAGCTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAGCGCGTGGAACGATCTTTCACTGATCCAAGCGTTGTGGTGACAACCTATGAAGGCCAACACACACATCCAAGCCCAGTTATGCCACGCTCAGGTGTCTCCGCTGGATACGCTACCAACTTTGGTTCGGTTTTCCCACCAGGAAACTACTTATCGCAGTATcaacaccagcaccacaaccatcaacaacaacaacTTTTCAACACATTGTCCTCTTTGAGTTTCCCTTATAATGATTCTTCTGCAAAGAACGCTGGTTTTACCCAAGAGAGACGACTTTGTAATCCTGGGACGAATGCATTTCTAAGGGACCATGGGCTTCTTCAAGATGTTGTTCCTTCACACATGTTGAAAGAAGAGTAG 942 0.413 MEKKEMAVKTEDAVGSSSFPCYNSNVYPFSSAFDFPEVEKNSLGFMELLGVQDYSPLLELPQLSTLSVPHHSTVKLASDNCSEVLNQLPATPNSSSISSASSDAVNDEQNKTLDQAEEDEEEEEGQQKTKKQLKPKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFTDPSVVVTTYEGQHTHPSPVMPRSGVSAGYATNFGSVFPPGNYLSQYQHQHHNHQQQQLFNTLSSLSFPYNDSSAKNAGFTQERRLCNPGTNAFLRDHGLLQDVVPSHMLKEE 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01300 313 SUPERFAMILY WRKY DNA-binding domain 151 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca02g01300 313 SMART WRKY_cls 159 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca02g01300 313 PIRSF WRKY_txn_fact_IIc 1 313 IPR017396 GO:0003700
Cca02g01300 313 PANTHER WRKY TRANSCRIPTION FACTOR 1 305 - -
Cca02g01300 313 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 305 IPR044810 GO:0003700
Cca02g01300 313 Pfam WRKY DNA -binding domain 160 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca02g01300 313 Coils Coil 106 133 - -
Cca02g01300 313 MobiDBLite consensus disorder prediction 86 109 - -
Cca02g01300 313 Gene3D WRKY domain 144 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca02g01300 313 MobiDBLite consensus disorder prediction 86 148 - -
Cca02g01300 313 ProSiteProfiles WRKY domain profile. 154 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01300 Cca-Chr2 31158624 31160580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01300 27 313 WRKY Transcription Factor Family AT2G47260 47.110 3.80e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Cca02g01300 WRKY 2.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01300 - - aprc:113872234 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01300 02 31158624 31160580 Cca02g01300 02 31158624 31160580 ECH
Cca03g02753 03 48902470 48903971 Cca02g01300 02 31158624 31160580 PCT