Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01235 ATGGTTCCCTTTTCCAGCATACTGGGGCACGAAAAGTGTGGAAGTTACTTAATTTTTAGTGGAGAAACTTACCTTGGCAATAATTTTCGTGCATTTTTGTATTTTCTTGGCCTTGCTTATTGTTTTATCGGATTATCGGCTATAACAGCCCGCTTCTTTAAATCGATGGAAAACGTGGTCAAGCACACAAGGAAGGTAGTGGAGGTAGATCCTGTTACTAAAACTGAAACTGTTAGATTTGAAAAGGTTTGGAATTACACTATTGCGGATATTAGCTTGTTGGCCTTTGGAACTAGCTTTCCTCAGATTTCATTAGCCACCATTGATGCTATACAAAACATAGGGAAGCTGTATGCTGGAGGCTTGGGACCCGGAACACTTGTTGGTTCTGCAGCATTTGACCTTTTCCCCATCCACGCTGTTTGTGTAGTAGTTCCAAAAGCAGGAGAGCTGAAGAAGATTGCTGATTTAGGAGTATGGCTGGTGGAGCTGTTTTGGTCATTTTGGGCTTACATTTGGTTATACATAATTTTGGAGATATGGACTCCAAACGTTGTGACTCTGTGGGAGGCCTTGTTGACAGTACTGCAGTATGGATTACTATTGACTCATGCATATGCCCAAGACAAACGTTGGCCCTATATTTCTCTACCTATTGCAAGAGATGAGAGGCCCGAGGATTGGGTGCCAGAAGAGACTCCTTATTTTCTACAGGAAGCCCAGGAAAAGGTGGGTTGCTCTGAGATAAAGCACGTTAATGAAGAAAATAGGGACACTGTTGATATTTTTTCCATTCATTCAGAAAACCCCACAGATCCATTGTATGTCAGAGTGCCTCGGATAGATGATGACGCTAAAATTTTGAACAAAGCTACGGAAACAATGTTGGAGGATACCCACTTGTTTACAATTTGGAGACAGCAATTTGTGGATGCACTGAGGTTGGAGATCCCAGAATCAAAAAAATTCAGAAATGTATATCTTCACATAGCTCGTATTTTCTGGCAACTGCTGCTTTTACCATGGAGATATCTGTTTGCTTTTGTTCCTCCATACCAAATTGCTCATGGTTGGATCTCCTTCATTTGCTCTCTGATTTTCATCAGTGGGATAGCTTACATTGTGACTAAGATCACAGATCTTATAAGTTGTGTTACAGGAATAAATGCTTACGTGATAGCATTTACAGCCCTAGCCAGTGGAACCTCATGGCCTGATCTAGTGGCAAGCAAGATTGCTGCCGAACGTCAAAAAACTGCAGATTCTGCAATTGCAAACATCACTTGCAGTAATTCAGTGAATATATATGTTGGTATCGGTGTTCCATGGCTTATTGATACTTTGTACAACTTCATTGCATATAGAGAACCCCTCCGAATCCAAAATGCAGGGGGGCTAAGCTTTTCGTTGATCGTTTTCTTCTCCACTTCTGTTGGGTGTATCTCAGTTTTGGTTTTAAGGCGTATAATTTTTGGCGCAGAGCTAGGAGGGCCTAGGCTCTGGGCATGGATTACATGTGCGTTCTTCATGTTGTTGTGGATTATTTTTATTGTACTGTCTTCACTCAAGGTTTCCGGATTCATTTAG 1587 0.4146 MVPFSSILGHEKCGSYLIFSGETYLGNNFRAFLYFLGLAYCFIGLSAITARFFKSMENVVKHTRKVVEVDPVTKTETVRFEKVWNYTIADISLLAFGTSFPQISLATIDAIQNIGKLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKIADLGVWLVELFWSFWAYIWLYIILEIWTPNVVTLWEALLTVLQYGLLLTHAYAQDKRWPYISLPIARDERPEDWVPEETPYFLQEAQEKVGCSEIKHVNEENRDTVDIFSIHSENPTDPLYVRVPRIDDDAKILNKATETMLEDTHLFTIWRQQFVDALRLEIPESKKFRNVYLHIARIFWQLLLLPWRYLFAFVPPYQIAHGWISFICSLIFISGIAYIVTKITDLISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQKTADSAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYREPLRIQNAGGLSFSLIVFFSTSVGCISVLVLRRIIFGAELGGPRLWAWITCAFFMLLWIIFIVLSSLKVSGFI 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01235 528 Pfam Sodium/calcium exchanger protein 357 520 IPR004837 GO:0016021|GO:0055085
Cca02g01235 528 Pfam Sodium/calcium exchanger protein 34 206 IPR004837 GO:0016021|GO:0055085
Cca02g01235 528 Gene3D - 86 220 IPR044880 -
Cca02g01235 528 Gene3D - 313 522 IPR044880 -
Cca02g01235 528 PANTHER SODIUM/CALCIUM EXCHANGER 305 528 - -
Cca02g01235 528 PANTHER SODIUM/CALCIUM EXCHANGER 221 290 - -
Cca02g01235 528 PANTHER SODIUM/CALCIUM EXCHANGER 6 212 - -
Cca02g01235 528 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 221 290 - -
Cca02g01235 528 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 305 528 - -
Cca02g01235 528 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 6 212 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01235 5 528 Antiporters AT2G47600 71.078 0.0 764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01235 02 30229639 30235983 Cca02g01235 02 30229639 30235983 ECH