Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01221 ATGTCTTCTGAAGCTTGGATGACGTCCCTCTCGTGTTCACCCTCAAAAGATGCAACTCCAAATTTTCCTCAGTGGCTGAGATTCATTTTCCTCTCTCCATGTCCTCAGAGGGCTCTTTTGTCAGTTGTTGACATTCTACTCTTGTTGACCCTCTTTGTGTTTGCGCTTGTAAAGCTTTGTTCCAGGTTCACTTCCAACGGAAACCACAACTCGGAGCTCGACAAGCCTCTTATCAGAAACAGAAGAGTTTCTGACAGGACAACAACATGGTTTAAGCTAACTCTAACTGCAACTGCTGTTTGGACAATATTGTACACGGTGGCTTGCGTTCTGGTGTTCACCAGTTCCACCGTGGAACCGTGGAAGCAAGTTGATGGGTTCTTTTGGTTACTTCAGGCCATAACACAACTAGTCCTAGCGGTGTTGATAGTCCATGAGAAAAGATTTGGAGCCGTTGCTCACCCTTTGTCGCTTAGAATATACTGGATTGCAAATTTCATCGTGGTTTCTTTGTTCACGGCTTCTGGGGCCATACGTTTGGTCTCTGTGGAAGTGGAAGAAGGGAAACACTTCAGCTTCATGGTTGATGACACGGTCTCTTTCATTTCTCTACCTTTGTCGCTTTTTCTGCTTTGTGTCGCGGTTAAAGGATCCACCGGGATTGAGTCCGGGGAAGAAACGCAACCGCTTATTGATGAGGAAACAAAGCTATTTGAGTACGACAAATCCAGTGTTACTGGCTTTGCTTCAGCTTCTGCTATATCCAAGGCCTTTTGGATTTGGATAAACCCGTTGCTGAGTAAAGGGTATGCATCACCGTTAAAGATTGATGATATTCCATCGCTTTCACCTCAGCATAGGGCTGAGAGGATGTCTGTTCTGTTTGAAACGAAGTGGCCTAAATCAGATGAGAGGTCGAAGCACCCGGTTCGAACCACTTTGGTTCGATGTTTCTGGAAGCAGATAGCCTTCACTGCCTTCCTTGCTGTTATTAGGCTATCTGTGATGTTTGTAGGGCCAGTTCTCATTCAAAGTTTTGTTGATTTCACAGCAGGGAAAGGTAGCTCTGTGTATGAAGGGTACTATCTCGTGTTGATTCTCCTGTGTTCTAAATTTGTAGAAGTTTTGACAACTCACCACTTTAACTTCAACTCTCAGAAGCTTGGAATGCTTATCAGATGCACCCTCATCACTTCTTTGTACAAGAAGGGGCTGAGGCTGTCGTGTTCCGCGAGACAGGATCATGGTGTTGGGCCTATTGTGAATTACATGGCCGTTGATACGCAGCAACTCTCTGATATGATGCTCCAGTTACACGCCGTGTGGATGATGCCGTTTCAAGTTGGCATTGGCTTGCTTTTGCTGTACAATTGTCTAGGAGCCTCGGTGGTGACGGCTTTGATTGGACTTCTTTGTGTTCTTGCGTTTATTGTGGTGGCCACTAGAAAGAACAAGCGTTACCAGTTCAATGCCATGATGAACCGTGATTCAAGGATGAAGGCAGTGAATGAGATGCTTAATTATATGCGTGTCATCAAGTTCCAGGCATGGGAAGATCATTTCAATGGGAGAATTTTGGGTTTCCGCGAGTCAGAGTTTGGCTGGCTTTCCAAGTTTATGTACTCAATCTGTGGCAATATCATTGTGTTGTGGAGCACGCCGATGTTGATATCAACTTTCACGTTTGCTACCGCAATTTGGCTTGGAGTTCCACTTGACGCAGGGACGGTTTTCACCACCACAACTGTGTTTAAGATCCTGCAGGAACCTATTAGGACCTTTCCTCAGAGTATGATATCTCTTTCACAAGCACTAGTATCACTTGGGAGGTTAGATAGGTACATGTCTAGCAGGGAATTATTGGATGATTCAGTTGAGAGAGAGGAAGGGTGTGGTGGACACACTGCTGTGGTGGTCAGAGATGGAGCTTTTAGCTGGGACGATGATGGCCAAGTTCAAGACTTAAAAGATATTAACTTGGAGATTAATAAGGGGGAGCTCACAGCAATTGTTGGGACTGTGGGGTCGGGGAAGTCTTCACTCCTTGCATCAATTCTTGGTGAGATGCACAAAATTTCTGGGAAGATTCAAGTTTGTGGGAGTACTGCTTATGTAGCACAAACATCTTGGATTCAAAATGGGACCATTGAAGAAAACATTCTTTTTGGTTTGCCAATGAACAGACAGAAGTACAATGAAGTTGTTAGAGTTTGTTGCTTGGAGAAAGACTTGGAAATGATGGAGTATGGGGATCAGACAGAGATTGGAGAGCGTGGCATCAATCTGAGTGGAGGTCAGAAGCAGCGTATACAGCTTGCCCGGGCTGTATATCAAGACGCTGATATATATCTTCTTGATGATGTTTTCAGTGCTGTTGATGCACATACTGGAACTGAAATATTCAAGGAATGCGTGAGGGGGTCTCTAAAAGGAAAGACCATTATTCTTGTAACACACCAAGTAGACTTCCTACATAATGTGGATCTTATAGTGGTGATGAAGGATGGAACGATAGTCCAATCAGGGAAGTACGATGATCTGCTTGATTCTGGACTGGATTTTAGTGCTCTTGTTGCAGCACACGAGACCTCTATGGAACTAGTGGAACAAGGTGCAGTCATGCCTGGGGAAAATTTGAACATCCCATTGAAATCTCCAAAGGAAACTTCTAACAACAGAGAACCCAATGGTGAAAGCAATTCTCTTGGCCAGCCCAAGGAAGGTTCTAAACTCATCAAGGAAGAGGAGAGAGAAACTGGGAAAGTTAGCTTACATGTCTATAAACTCTACTGCACTGAGGCTTTTGGGTGGTGGGGCATTACAGGAATAATCTTTCTTTCTGTGTTGTGGCAAGCATCTATGATGGCAAGTGATTATTGGCTGGCATATGAAACATCAGAAGAGCGTGCTCAGTTCTTTGATCCTTCTGTGTTCATTTCAATCTACGCAATTATTGGTGTAGTTTCAGTTGTTTTAATTGTGCTAAGATCCTACTCTGTTACAATCTTGGGGTTAAAGACAGCACAGATTTTCTTCTCACAAATTCTCCACAGCATCTTGCATGCCCCCATGTCTTTCTTTGACACTACTCCATCCGGGAGAATTCTAAGCAGGGCATCCACTGATCAGACCAATGTTGATATCTTTATCCCCCTCTTCTTCAATTTTGTGGTGGCAATGTACATTACAGTGGTCAGCATCTTCATAATCACGTGTCAAAATTCTTGGCCAACAGCTTTCTTGTTAATTCCTCTCGCATGGTTAAACATTTGGTACCGGGGTTATTTTCTTGCTTCATCTCGTGAGTTAACTCGCCTGGATTCAATTACAAAAGCACCTGTCATTCACCATTTCTCTGAAAGCATTTCTGGGGTCATGACAATCCGCGCATTCAGAAAGCAGAAGGAATTTTGCGCAGAAAATGTTAAACGAGTGAATGCTAATTTGCGAATGGATTTCCACAACTTCAGTTCCAATGCGTGGTTGGGTTTCCGCTTAGAATTGCTTGGAAGCTTGGTTTTTTGTTGTTCTGCTATGTTCATGATCATGTTACCCAGCAGTATCATAAAGCCAGAGAATGTTGGTTTGTCACTCTCATATGGATTGTCATTAAATTCCGTGATGTTCTGGGCTATATACATGAGTTGTTTCATTGAAAACAAGATGGTATCTGTTGAGAGGATCAAACAGTTCACAAATATTCCATCGGAAGCAACATGGAACATTAAGGATCGTCTGCCTCCTTCAAATTGGCCCGGTCAAGGCCATGTTGATATCAAAGATTTGCAGGTCAGATATCGTCCAAACACTCCTTTGGTTCTTAAAGGCATTACCTTAAGCATCGACGGAGGAGAAAAAATTGGCGTAGTTGGTAGAACAGGAAGTGGAAAATCAACTTTAATTCAAGTTTTCTTCAGACTGGTGGAACCCTCAGGAGGGAAAATAATCATTGATGGCATTGACATATCCGCCTTAGGGCTTCATGATCTCAGATCAAGGTTTGGTATCATCCCTCAGGAGCCTGTCCTTTTTGAAGGAACCGTAAGAAGTAACATCGATCCAACTAGACAGTATACAGATGAAGAAATATGGAAGAGTTTGGAACGTTGTCAACTAAAAGACTCAGTGGCTTCTAAGCCTGAGAAACTTGACGCTTCAGTGGTTGATAATGGAGATAACTGGAGCGTGGGGCAGAGACAGTTGCTTTGTTTAGGAAGGGTTATGCTTAAGCAAAGCAGGTTGTTGTTTATGGATGAGGCAACAGCTTCTGTTGACTCTCAAACCGATGCTATAATTCAGAGGATCATCAGAGAGGACTTTGCAGCACGTACCATCATAAGCATTGCTCATAGAATACCAACAGTTATGGACTGTGATAGAGTTCTAGTTATAGATGCAGGACGTGCCAAAGAATTTGACAAACCCTCCAACTTGCTCCAAAGGCAATCTCTCTTTGGGGCATTAGTTCAAGAGTATGCCAACCGCTCCAGTGGCCTTTAA 4500 0.4349 MSSEAWMTSLSCSPSKDATPNFPQWLRFIFLSPCPQRALLSVVDILLLLTLFVFALVKLCSRFTSNGNHNSELDKPLIRNRRVSDRTTTWFKLTLTATAVWTILYTVACVLVFTSSTVEPWKQVDGFFWLLQAITQLVLAVLIVHEKRFGAVAHPLSLRIYWIANFIVVSLFTASGAIRLVSVEVEEGKHFSFMVDDTVSFISLPLSLFLLCVAVKGSTGIESGEETQPLIDEETKLFEYDKSSVTGFASASAISKAFWIWINPLLSKGYASPLKIDDIPSLSPQHRAERMSVLFETKWPKSDERSKHPVRTTLVRCFWKQIAFTAFLAVIRLSVMFVGPVLIQSFVDFTAGKGSSVYEGYYLVLILLCSKFVEVLTTHHFNFNSQKLGMLIRCTLITSLYKKGLRLSCSARQDHGVGPIVNYMAVDTQQLSDMMLQLHAVWMMPFQVGIGLLLLYNCLGASVVTALIGLLCVLAFIVVATRKNKRYQFNAMMNRDSRMKAVNEMLNYMRVIKFQAWEDHFNGRILGFRESEFGWLSKFMYSICGNIIVLWSTPMLISTFTFATAIWLGVPLDAGTVFTTTTVFKILQEPIRTFPQSMISLSQALVSLGRLDRYMSSRELLDDSVEREEGCGGHTAVVVRDGAFSWDDDGQVQDLKDINLEINKGELTAIVGTVGSGKSSLLASILGEMHKISGKIQVCGSTAYVAQTSWIQNGTIEENILFGLPMNRQKYNEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDADIYLLDDVFSAVDAHTGTEIFKECVRGSLKGKTIILVTHQVDFLHNVDLIVVMKDGTIVQSGKYDDLLDSGLDFSALVAAHETSMELVEQGAVMPGENLNIPLKSPKETSNNREPNGESNSLGQPKEGSKLIKEEERETGKVSLHVYKLYCTEAFGWWGITGIIFLSVLWQASMMASDYWLAYETSEERAQFFDPSVFISIYAIIGVVSVVLIVLRSYSVTILGLKTAQIFFSQILHSILHAPMSFFDTTPSGRILSRASTDQTNVDIFIPLFFNFVVAMYITVVSIFIITCQNSWPTAFLLIPLAWLNIWYRGYFLASSRELTRLDSITKAPVIHHFSESISGVMTIRAFRKQKEFCAENVKRVNANLRMDFHNFSSNAWLGFRLELLGSLVFCCSAMFMIMLPSSIIKPENVGLSLSYGLSLNSVMFWAIYMSCFIENKMVSVERIKQFTNIPSEATWNIKDRLPPSNWPGQGHVDIKDLQVRYRPNTPLVLKGITLSIDGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGKIIIDGIDISALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTRQYTDEEIWKSLERCQLKDSVASKPEKLDASVVDNGDNWSVGQRQLLCLGRVMLKQSRLLFMDEATASVDSQTDAIIQRIIREDFAARTIISIAHRIPTVMDCDRVLVIDAGRAKEFDKPSNLLQRQSLFGALVQEYANRSSGL 1499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01221 1499 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1257 1491 IPR003439 GO:0005524
Cca02g01221 1499 MobiDBLite consensus disorder prediction 883 906 - -
Cca02g01221 1499 CDD ABC_6TM_ABCC_D1 324 611 IPR044746 GO:0140359
Cca02g01221 1499 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524
Cca02g01221 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 636 858 IPR027417 -
Cca02g01221 1499 SMART AAA_5 664 837 IPR003593 -
Cca02g01221 1499 SMART AAA_5 1283 1476 IPR003593 -
Cca02g01221 1499 Gene3D ABC transporter type 1, transmembrane domain 310 617 IPR036640 GO:0005524|GO:0016021
Cca02g01221 1499 Gene3D ABC transporter type 1, transmembrane domain 904 1238 IPR036640 GO:0005524|GO:0016021
Cca02g01221 1499 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 323 603 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cca02g01221 1499 Pfam ABC transporter 655 788 IPR003439 GO:0005524
Cca02g01221 1499 Pfam ABC transporter 1274 1422 IPR003439 GO:0005524
Cca02g01221 1499 MobiDBLite consensus disorder prediction 879 910 - -
Cca02g01221 1499 Pfam ABC transporter transmembrane region 943 1185 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cca02g01221 1499 Pfam ABC transporter transmembrane region 324 590 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cca02g01221 1499 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 942 1220 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cca02g01221 1499 Gene3D - 1240 1490 IPR027417 -
Cca02g01221 1499 CDD ABCC_MRP_domain2 1255 1475 - -
Cca02g01221 1499 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 637 860 IPR003439 GO:0005524
Cca02g01221 1499 CDD ABCC_MRP_domain1 637 837 - -
Cca02g01221 1499 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 83 1498 - -
Cca02g01221 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1250 1490 IPR027417 -
Cca02g01221 1499 SUPERFAMILY ABC transporter transmembrane region 314 616 IPR036640 GO:0005524|GO:0016021
Cca02g01221 1499 CDD ABC_6TM_ABCC_D2 940 1232 IPR044726 GO:0140359
Cca02g01221 1499 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 83 1498 - -
Cca02g01221 1499 Gene3D - 618 873 IPR027417 -
Cca02g01221 1499 SUPERFAMILY ABC transporter transmembrane region 937 1237 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01221 Cca-Chr2 30013585 30023249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01221 1255 1497 Calmodulin-binding Proteins AT2G36910 31.200 1.06e-32 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01221 - K05666 gmx:100793361 2680.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01221 02 30013585 30023249 Cca02g01221 02 30013585 30023249 ECH