Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01211 ATGGCACCAATCAAACTCTATGGAAACCCTTTCTCAACAGCCACCATGCGAGCATCTGCTTCCCTGCACGAGAAGGAGGTTGAGTTTGAGTTTGTTCAAGTTGACATGAAAAATGGTGAACACAAAAAGGAGCCCTTCCTTTCCCTTAATCCTTTTGGCCAAGTTCCAGCGTTTGAAGATGGAGATTTGAAGCTCTTTGAATCAAGGGCAATAACTCAATATGTTGCTCACGAGTATGCTGACAAGGGGACCCCACTGATAAGCAACGACTCGAAGAAGATGGCAATATTGAGGATGTGGATAGAAGTAGAGAACCATCAGTATGATCAAGCAGCTTCAAAACTCGTGTGGGAGCAGGTGGTAAAGCCTATGTATGGGATGACAACGGATCCAGCAGTAGTGGAAGAGCACGAAACCAAGCTAGGAACTGTTCTTGATTTCTATGAGAAGACATTGTCAGGGTCCAAATACTTGGCAGGAGAGTGCTTCACCTTGGCGGATCTGCATCACCTTCCCACCATTAATTACTTGATGAGCACACAGAGCAAGAAGTTGTTTGAATCACGACCCCATGTTAATGCATGGGTTTCTGATATTACAGCAAGACCAGCTTGGTCTAAGGTCCTTTCCATGCTAAAGCGATAA 645 0.4496 MAPIKLYGNPFSTATMRASASLHEKEVEFEFVQVDMKNGEHKKEPFLSLNPFGQVPAFEDGDLKLFESRAITQYVAHEYADKGTPLISNDSKKMAILRMWIEVENHQYDQAASKLVWEQVVKPMYGMTTDPAVVEEHETKLGTVLDFYEKTLSGSKYLAGECFTLADLHHLPTINYLMSTQSKKLFESRPHVNAWVSDITARPAWSKVLSMLKR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01211 214 Gene3D - 89 214 - -
Cca02g01211 214 Pfam Glutathione S-transferase, C-terminal domain 113 203 IPR004046 -
Cca02g01211 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Cca02g01211 214 SUPERFAMILY GST C-terminal domain-like 85 208 IPR036282 -
Cca02g01211 214 CDD GST_N_Phi 3 77 - -
Cca02g01211 214 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Cca02g01211 214 Gene3D Glutaredoxin 1 87 - -
Cca02g01211 214 SFLD Main (cytGST) 1 212 - -
Cca02g01211 214 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Cca02g01211 214 CDD GST_C_Phi 92 209 IPR034347 -
Cca02g01211 214 SFLD Main.5: Phi-like 1 212 - -
Cca02g01211 214 PANTHER GLUTATHIONE S-TRANSFERASE RHO 4 213 - -
Cca02g01211 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 214 IPR010987 -
Cca02g01211 214 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 4 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01211 Cca-Chr2 29822541 29824292 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01211 1 209 Glutathione S-transferase Gene Family AT1G02930 64.115 4.47e-99 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01211 K00799 - gmx:100799868 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01211 02 29822541 29824292 Cca02g01211 02 29822541 29824292 ECH