Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01209 ATGTCTTCCGAAGTAGGGATGGTGGGTGTGGAGAGCAATGGAAACATTGAAAATCAACATCAGAGCCAGGAACCAGTACTTTCTGATCAACCAGTGCTCACGGAGAAGAAGGTTTCATGGCAAAAATTGCCACGAAATGATTCTCTCGACATGGAATCACGCAGCTTCCCTAGATCCTCTCATGCCGCTAAAGGGCTATCGACGTCGGTGATTATGCATCTAGCATTTCAAAGCATCGGAATTGTATACGGAGACATAGGAACATCACCATTATATGTGTATGCAAGTACCTTTTCTGATGGCATAAAGCACGACGATGACATCTTGGGTGTTCTTTCTTTGATCTTTTATACTCTCACTCTCATTCCTCTTCTTAAGTACGTATTCATCGTCCTACGGGCCACTGATAACGGAGATGGAGGGACTTTCGCTTTATACTCCTTGATATGTCGTTATGCCAAAGTGGGGCTTATTCCAAATCAACAACTTGAAGATGCAGAAGTGTCTAATTATAAGTTGGAGTTGCCTAGGAATAATCGCATCAAGAGGGCTTCAAGGCTTAAGTCTAAGCTTGAGAATAGCTACTTTGCCAAACTCTTCCTCTTGCTAGTTACCATGCTTGGCACTTCCATGGTCATTGGGGATGGCGTTCTCACACCTTGCATCTCTGTTTTATCTGCCGTGGGAGGGATCCAGGAAGCTGACGATAAATTGACTGACGGTACGGTTGTTGGAATATCCATAGCAATCCTGATATGCCTTTTCATGGTTCAAAGATTCGGAACTGATAAAGTAGGTTACAGTTTTGCTCCTATCATTTGTGTGTGGTTCGCCTTCATCGGAGGCATTGGTCTGTACAATTTCATCAAGTATGATCCAGGAGTTCTCAAAGCAATAAATCCAAAATACATTGTAGATTATTTCAGAAGGAACAAGAAAGATGCTTGGATTTCTCTTGGTGGTGTTGTGTTGGCTATAACAGGAACTGAAGCACTATTTGCTGATGTTGGACATTTCACAGTGAGGTCCATACAGATAAGCATGTGCTCTGTAACATACCCTGCTCTTGTACTTGCTTACACTGGACAAGCCTCCTTTCTTCGCAAACACAAGGACCTTGTTCCACACACTTTCTTCAAGTCCATACCAAATCATTTATATTGGCCAATGTTTGTTGTTGCTGTTATGGCATCCATCATAGCTTCTCAAGCCATGATCTCCGGGACTTTTTCTATCATCCAACAATCCCTCTCACTTGGATGTTTTCCTCGTGTGAAAGTAGTGCATACATCAGCCAAGTACGAAGGACAAGTTTACATCCCAGAAATCAATTTCATTCTCATGATTGCATGTGTTGCAGTCACAGCTGGATTTAAAACTACCGAAAAAATTGGCAATGCTTATGGGATAGCAGTGGTGTTCGTGATGACACTCACCTCTGCATTGCTAGTGTTAATCATGATCATGATATGGAAGACTCACATACTTTTGGTTATCAGCTATGTGCTCATCATTGGATCGGTTGAGCTTATCTATTTAAGCTCAGTGCTATACAAATTCAAAGAAGGAGGGTATCTCCCTCTTGCCTTTGCAGCATTGCTAATGATCATCATGTACATCTGGAATGACGTATATCGAAGAAAGTACCATTACGAATTGAATCACAAGATTTCACCACAGAAGCTCAAGGAGATAGCTATTGGGACAAACCTAGTTCGAATGCATGGCCTTGCCATATTCTATTCCGAGCTTGTTCAAGGCATTCCACCCATTTTCAAACACTACGTGGTAAATATTCCTGCATTGCACTCCGTGGTTGTCTTTGTGTCCATCAAATCATTGCCCATTAGCAAAGTTCCTGTGGAAGAGAGGTTTCTATTTCGCAAAGTGGAACATGAAGAACTCAACGTGTTCCGGTGTGTTGCTAGATACGGATACACTGACGTGCGCAACGAGCAAGAGCCTTTTGACTATTTGTTGGTCAAAAGGTTGAAGGAGTTTATTAGTGGTGGATTTTTGGCGTCACAAAGAGTGATGCTGATGCAAGATGATGAAAGTGAAGAAAAAACCAAAGGTGGTAGCGGTGATGAGATTGATTGGGTGCAAAAGGGTGGTGATAAAGATAGAGTGGTGGAAGAGAGTGAGGTGGAGACTATTGAAAAAGCAGTGCGAGGAGGTGTTGTTCATTTGATTGGTGAGAGTGAGGTTGTTGCTAGCGCAGGAGCTGGCATATGGAAAAGATTTCTGATAGACTATGCTTACAATTTCTTGAAGAAGAACTTGAGGCAAAGTGATAAAGTATTTGATATTCCTCATATGCGTATGGTCAAAGTGGGAATGACTTATGAACTTTGA 2355 0.4208 MSSEVGMVGVESNGNIENQHQSQEPVLSDQPVLTEKKVSWQKLPRNDSLDMESRSFPRSSHAAKGLSTSVIMHLAFQSIGIVYGDIGTSPLYVYASTFSDGIKHDDDILGVLSLIFYTLTLIPLLKYVFIVLRATDNGDGGTFALYSLICRYAKVGLIPNQQLEDAEVSNYKLELPRNNRIKRASRLKSKLENSYFAKLFLLLVTMLGTSMVIGDGVLTPCISVLSAVGGIQEADDKLTDGTVVGISIAILICLFMVQRFGTDKVGYSFAPIICVWFAFIGGIGLYNFIKYDPGVLKAINPKYIVDYFRRNKKDAWISLGGVVLAITGTEALFADVGHFTVRSIQISMCSVTYPALVLAYTGQASFLRKHKDLVPHTFFKSIPNHLYWPMFVVAVMASIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSAKYEGQVYIPEINFILMIACVAVTAGFKTTEKIGNAYGIAVVFVMTLTSALLVLIMIMIWKTHILLVISYVLIIGSVELIYLSSVLYKFKEGGYLPLAFAALLMIIMYIWNDVYRRKYHYELNHKISPQKLKEIAIGTNLVRMHGLAIFYSELVQGIPPIFKHYVVNIPALHSVVVFVSIKSLPISKVPVEERFLFRKVEHEELNVFRCVARYGYTDVRNEQEPFDYLLVKRLKEFISGGFLASQRVMLMQDDESEEKTKGGSGDEIDWVQKGGDKDRVVEESEVETIEKAVRGGVVHLIGESEVVASAGAGIWKRFLIDYAYNFLKKNLRQSDKVFDIPHMRMVKVGMTYEL 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01209 784 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 37 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca02g01209 784 PANTHER POTASSIUM TRANSPORTER 37 783 - -
Cca02g01209 784 Pfam K+ potassium transporter 75 648 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca02g01209 784 TIGRFAM kup: potassium uptake protein 74 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca02g01209 784 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01209 Cca-Chr2 29789992 29794683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01209 13 784 Inorganic Solute Cotransporters AT4G13420 55.247 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01209 K03549 - pvy:116117139 1131.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01209 02 29789992 29794683 Cca02g01209 02 29789992 29794683 ECH