Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01181 ATGACTGGCAGTAATGAACTCAACCTCAATGAATCTAAGAGTGTTGTTCCACTCAATACTTGGGTGCTTATATCCAATTTCAAGCTGGCTTACAATCTTCTAAGACGTGCTGATGGAACATTCAATCGAGAGTTGGCAGAATTCCTCGACCGCAAGGTCCCGGCTAATACAATTCCGGTTGATGGAGTGTTCTCTTTTGATCATGTTGATCGAAACACCGGGCTCTTCAACAGGGTGTATCAACTAGCTCCCCAAAACGAGTCTCGGTGTAGCATAATAGAGTTGGAGAAGCCTCTGAGCACAACAGAGATTGTTCCTGTTATAATTTTCTTCCACGGTGGAAGCTTCTCTCATTCATCCGCGAACAGTGCTATCTATGACACTTTCTGCCGCCGCCTTGTGAGCATTTGCAAGGCCGTGGTTGTTTCTGTAAACTACAGGCGATCGCCGGAGTACCGGTATCCTTGTGCCTATGACGATGGCTGGGCGGCGCTTAAGTGGGTTAAGTCAAGGACGTGGCTTCAGAGTGGAAAGGATTCCAAGGTTCATGTGTACTTGGCTGGGGATAGTTCTGGTGGTAATATTGCTCATCATGTGGCTGTGAGGGCTGCTGAGGAAGATATTGAGGTGCTTGGTAACATTCTTCTTCATCCACTGTTTGGTGGGGAGAAGCGAACCGAGTCAGAGAAGAAACTGGATGGCAAGTACTTTGTGAGGCTGCAAGACAGGGACTGGTACTGGAGAGCTTTTCTTCCTGAAGGTGCGGATAGAGACCATCCGGCGTGTAACCCGTTTGGCCCCAAGGGTAAAAGCCTTGCAGGACTCAAGTTCCCCAAGAGTCTTGTTTGTGTGGCTGGTTTGGATCTTCTCCAAGATTGGCAATTGGAATATGTGGAAGGTCTTAAGAATTCTGGCCAAGATGCCAAACTTCTTTACCTAAAGGAGGCCACTATTGGTTTCTACTTCTTGCCAAATAATGATCATTTCTATACCCTTATGGAGGAGATAGAGAACTTCGTCAATTCTAACTGTTAA 1035 0.4667 MTGSNELNLNESKSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVDRNTGLFNRVYQLAPQNESRCSIIELEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSICKAVVVSVNYRRSPEYRYPCAYDDGWAALKWVKSRTWLQSGKDSKVHVYLAGDSSGGNIAHHVAVRAAEEDIEVLGNILLHPLFGGEKRTESEKKLDGKYFVRLQDRDWYWRAFLPEGADRDHPACNPFGPKGKSLAGLKFPKSLVCVAGLDLLQDWQLEYVEGLKNSGQDAKLLYLKEATIGFYFLPNNDHFYTLMEEIENFVNSNC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01181 344 PANTHER GIBBERELLIN RECEPTOR GID1B 2 341 - -
Cca02g01181 344 PANTHER ARYLACETAMIDE DEACETYLASE 2 341 - -
Cca02g01181 344 SUPERFAMILY alpha/beta-Hydrolases 101 341 IPR029058 -
Cca02g01181 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Cca02g01181 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Cca02g01181 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Cca02g01181 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01181 Cca-Chr2 29368138 29370514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01181 1 342 Carbohydrate Esterase AT3G63010 76.385 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01181 K14493 - gmx:100804463 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01181 02 29368138 29370514 Cca02g01181 02 29368138 29370514 ECH
Cca02g01181 02 29368138 29370514 Cca03g02619 03 47555755 47558929 ECH
Cca03g02065 03 40894749 40897698 Cca02g01181 02 29368138 29370514 PCT