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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca02g01151
ATGGCGATGTCCTTGGAGTGCAAACACCAGAATCACAGTACTATTGGCAGCACTCCACAATGCACATTGCGTGCGTACGTAGCTGGCAATAACAGAGCATCAAGAAGCAGAGCAGAAACAGAGCACGCTCACTCGCAACCGCAAACCCTACTACGCTCACTCTTTCTCCTCTTCATTTCTACAACATTCTCCTCACAAAATCAAACCCATTACTTTGGCTTCCAAAATATTGCAATCCCAGCACCTTTGCTTTCATTTGGTGTAATGGAAGAGCAAAGTAACCAAGAGAACCATGTGCAACTAATGTCCTGTGACACTGGGGGAACCAGCAATGATGTCTCTTATTCAGCTGAGCCTCATCTATTTCCCAACCCAAAATTTGTCACTGCAGCATCTTCTGGCAGAAATGGAAGCCACTGGACTTGCCTCCCAAAGCCATCTCACAACTATGTAGAGTATCTTTCAGAATCCTCAACTTATCTGCCAAACTCTTCCACTGAATACATGTTTGGGAACAGTTACCTGCCTCTTGGAAACATCAATGATGGTAATGGGGTCAGTGGAACAGACAGAAACTTCTTTTACAATGATCCAGGAAAAGTTTGTGCCTTTAAGCCTATTGCTTCTTCTAGTGATGACCTTCATATTAGGAAGTTGGGGTTTTGGAGGGGTGATGAAGGAGAGGAAGTAATTAAAGTTGAAACTGAAAGTGGTCAAAATCTTCTTTATCCTGAGAGTCATGATTCATGGACAGCAGATTCAGTTGGAGATAAGCATAATCCAATGGTAATGGTTGGTGCACCTGCTTTACTTCCAAAACAAGGATGCAGCTCCTCAAAACAGAAAGCACGTGTCACTGACCGTCAACGCAGGCAACGTATTGCTGACAACCTCAAAGCCTTACACGAATTGCTTCCAAATCCAGCAGAGGGAAGTCAAGCGTACGTACTAGACGATATAATCGACTATGTCAAATATTTGCAGCTTCAAATAAAGGAACAAAGTGGAAGTAGATTGCAAGCGGACTCAACTGCTATACCACTAGTTTTTCATGAGGGTTACGGCCATTATATTAATCAACAAATGCTCAATGAACCCCTTGAGGAGATAATTGGGAAACTACTTGAAGAACATTCAGCAGCAGCTGGTCAGCTACTAGAGAGTAAGGGTCTTTTTCTTCTGCCTATGGCTTTGGTTGATGAGTTGGATGAAGCCATGCAAATGTTTGGCGGGAGTGCACTTGTCTGA
1248
0.4343
MAMSLECKHQNHSTIGSTPQCTLRAYVAGNNRASRSRAETEHAHSQPQTLLRSLFLLFISTTFSSQNQTHYFGFQNIAIPAPLLSFGVMEEQSNQENHVQLMSCDTGGTSNDVSYSAEPHLFPNPKFVTAASSGRNGSHWTCLPKPSHNYVEYLSESSTYLPNSSTEYMFGNSYLPLGNINDGNGVSGTDRNFFYNDPGKVCAFKPIASSSDDLHIRKLGFWRGDEGEEVIKVETESGQNLLYPESHDSWTADSVGDKHNPMVMVGAPALLPKQGCSSSKQKARVTDRQRRQRIADNLKALHELLPNPAEGSQAYVLDDIIDYVKYLQLQIKEQSGSRLQADSTAIPLVFHEGYGHYINQQMLNEPLEEIIGKLLEEHSAAAGQLLESKGLFLLPMALVDELDEAMQMFGGSALV
415
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca02g01151
415
Gene3D
-
277
345
IPR036638
GO:0046983
Cca02g01151
415
ProSiteProfiles
Myc-type, basic helix-loop-helix (bHLH) domain profile.
278
327
IPR011598
GO:0046983
Cca02g01151
415
Pfam
Helix-loop-helix DNA-binding domain
280
328
IPR011598
GO:0046983
Cca02g01151
415
SUPERFAMILY
HLH, helix-loop-helix DNA-binding domain
278
340
IPR036638
GO:0046983
Cca02g01151
415
PANTHER
TRANSCRIPTION FACTOR BHLH83-RELATED
101
399
-
-
Cca02g01151
415
CDD
bHLH_AtbHLH_like
286
333
IPR045239
-
Cca02g01151
415
PANTHER
TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1
101
399
-
-
Cca02g01151
415
SMART
finulus
284
333
IPR011598
GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca02g01151
Cca-Chr2
28934569
28941021
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca02g01151
285
405
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT4G30980
39.837
1.72e-20
90.5
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Cca02g01151
HLH
3.9e-06
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca02g01151
-
-
gmx:100788949
484.567
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Cca02g01151
02
28934569
28941021
Cca02g01151
02
28934569
28941021
ECH
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