Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01127 ATGCCAAGCACAAGAAATCTGAGGTACCTCAACCTCAATATGTGTTGCTCAAATTCAGCCACTCCTGAATCAGAATCTCCTCCATTGAGCCCCATCACCACTTCCTCAAATCATAACTCTCAATGTCCATCTCCTTCTTCAATCATGATCAAGAACTTCAACTCTATCTATGACCCTACCTTAACCTCTCACCACTCTTTCACCTCAACTTTTTTCTCCACCACCACTTTATTTGAGTCCGAACCTGAACCTGAACCTGAACCCGCCGATTTCGCCACCGCCTTTGCCTCACAACGCTTCTTCTTCTCCTCCCCAGGCCactccaattccctcaccaaggccaacaccaacacatctcaacactcaccatcaTTGAGAGATGATGGTGATGTTGAGAAAATGAAGAAGAAGAAGCTGTTGTTCAAAGGCAGTGTGGCCGTGGCAACATACTCGCCGGATCCTTACGTGGATTTCCGGCGATCAATGCAGGAGATGGTGGAGGCGCGTCCAGAGTTGATGGACGTGAAGTCCAATTGGAACATTCTTCACGAGCTTCTTCTATGCTACCTTGCTCTCAACCCAAAGAGCACACACAAGTTCATTCTTGGTGCCTTTGCCGATCTCCTCGTTAGCCTCATGTCTTTCTAG 648 0.4367 MPSTRNLRYLNLNMCCSNSATPESESPPLSPITTSSNHNSQCPSPSSIMIKNFNSIYDPTLTSHHSFTSTFFSTTTLFESEPEPEPEPADFATAFASQRFFFSSPGHSNSLTKANTNTSQHSPSLRDDGDVEKMKKKKLLFKGSVAVATYSPDPYVDFRRSMQEMVEARPELMDVKSNWNILHELLLCYLALNPKSTHKFILGAFADLLVSLMSF 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01127 215 ProSiteProfiles OVATE domain profile. 147 211 IPR006458 -
Cca02g01127 215 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 145 213 IPR006458 -
Cca02g01127 215 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 9 214 IPR038933 GO:0045892
Cca02g01127 215 MobiDBLite consensus disorder prediction 20 43 - -
Cca02g01127 215 MobiDBLite consensus disorder prediction 107 129 - -
Cca02g01127 215 MobiDBLite consensus disorder prediction 107 124 - -
Cca02g01127 215 Pfam Transcriptional repressor, ovate 151 212 IPR006458 -
Cca02g01127 215 PANTHER TRANSCRIPTION REPRESSOR OFP12 9 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01127 Cca-Chr2 28573535 28574399 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Cca02g01127 Ovate 3.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01127 - - gmx:102663296 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02132 03 41861285 41861981 Cca02g01127 02 28573535 28574399 PCT