Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01125 ATGAATGGACGTCATCAAAATTTTGGTGCTACCGCAAAATCCATGGGTGGAATTTTTCGAAAGTTTTACACTAGAAATCAAATAGCAAGCGGAGCCCGAAGACGAGCTTTACCTTGCGCCGAAGGGCCACTTGTCATGGTTGAGATCGAGATGGATACCGAAACTGCTGCAAATGCAAATGCGGCTCCAACCAATGAGACTCCAAAAAATGTTCCCATCTCTCATCATTCCTCACATCCTCCTCTTAATGAGAGGATTATTTCATCCATGACCCGGAGATCTGTTGCTGCACACCTGTGGCATGACCTTGAGATAGGGCCTGGTGCTCCAACCATCTTCAATTGTCTATTTGATGGACACAATGGATCTGCTGCTGCTATTTATGCCAAGGAGAATCTTCTAAATAATGTAtttgttggcaatctaaaaccaccagaaaatgtaaacgtaaaaataataataattttgaggaggttttaa 480 0.3812 MNGRHQNFGATAKSMGGIFRKFYTRNQIASGARRRALPCAEGPLVMVEIEMDTETAANANAAPTNETPKNVPISHHSSHPPLNERIISSMTRRSVAAHLWHDLEIGPGAPTIFNCLFDGHNGSAAAIYAKENLLNNVFVGNLKPPENVNVKIIIILRRF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01125 159 PANTHER INORGANIC PYROPHOSPHATASE 67 124 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Cca02g01125 159 MobiDBLite consensus disorder prediction 60 79 - -
Cca02g01125 159 Gene3D - 73 157 IPR036457 -
Cca02g01125 159 PANTHER INORGANIC PYROPHOSPHATASE-RELATED 67 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01125 Cca-Chr2 28558782 28563662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01125 105 138 PP2C-type Phosphatase Gene Family AT1G47380 69.444 1.38e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01125 K01507 - ccaj:109817747 227.639