Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01112 ATGTCCAAATGCAATAATAGACAAAATCCTAGATCAGCTAATCTTGTTACCGTAGATTTCAATAACATCTTAAGTGTTGAATTTGATGATATTGCTCAGGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTTTAAAAATTACCATATTGATGGCAACAAAGAAATGATAGCAATTGGAACCATGAACATAGTGGGTTCTTTCACCTCTTGCTACCTCACAACAGGGCCATTTTCGCGTTCAGCGGTGAACTACAATGCTGGATGCAAGACAGCAGCATCCAACATTATAATGTCAATTGCAGTAATGTTGACATTGTTATTCCTAACACCCTTGTTCCATTACACTCCTCTGGTGGTTCTTTCAGCCATTATTGTATCAGCAATGCTTGGCCTCATAGACTATCAAGCAGCCATTCATCTTTGGAAGATTGACAAATTTGATTTTGTCGTGTGCATGAGTGCATACATTGGTGTGGTCTTTGGCAGCGTTGAAATTGGCTTAGTCATAGCTGTTGCAATATCAGTACTTCGGATACTTCTATTTGTTGCAAGGCCAAGGACATTTGTTTTGGGACACATTCCAAATTCTGTGATATACAGAAATGTTGAGCAATATCCAAATGCAAAACACGTTCCTGGAATCCTAATTCTAGAGATTGATGCACCAATTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCACAAGGTGGATTGATGAAGAGGAAGACAGAATCAAAGCTACAGGGGAGACAAGTTTGCAGTATGTTATTATGGATATGAGTGCTGTTGGGAACATAGATACAAGCGGAATAAGTATGCTTGAAGAGGTCAAGAAGATTACTGACAGAAGAGAGCTACAATTTATTTTGGTCAATCCTGGAAGTGAGGTGATGAAGAAATTGAACAAATCGAAGTTCCAAAATCATTTAGGTCAGAAATGGATCTATCTAACTGTTGAAGAGGCCGTTGGAGCATGCCACTTCATGCTCAGTGAATCCAAAATGAACCCCAAGAAAGATGGATCAGAGGGTTGGAACAATGTGTGA 1053 0.3913 MSKCNNRQNPRSANLVTVDFNNILSVEFDDIAQEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIIMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFVVCMSAYIGVVFGSVEIGLVIAVAISVLRILLFVARPRTFVLGHIPNSVIYRNVEQYPNAKHVPGILILEIDAPIYFANASYLRERITRWIDEEEDRIKATGETSLQYVIMDMSAVGNIDTSGISMLEEVKKITDRRELQFILVNPGSEVMKKLNKSKFQNHLGQKWIYLTVEEAVGACHFMLSESKMNPKKDGSEGWNNV 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01112 350 PANTHER SLC26A/SULP TRANSPORTER-RELATED 33 348 - -
Cca02g01112 350 PANTHER SULFATE TRANSPORTER 33 348 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cca02g01112 350 ProSiteProfiles STAS domain profile. 205 328 IPR002645 -
Cca02g01112 350 Pfam Sulfate permease family 34 154 IPR011547 GO:0016021
Cca02g01112 350 Pfam STAS domain 206 324 IPR002645 -
Cca02g01112 350 SUPERFAMILY SpoIIaa-like 207 328 IPR036513 -
Cca02g01112 350 CDD STAS_SulP_like_sulfate_transporter 206 321 - -
Cca02g01112 350 Gene3D STAS domain 185 330 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01112 Cca-Chr2 28407927 28409521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01112 34 350 Inorganic Solute Cotransporters AT4G02700 68.770 7.60e-158 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01112 K17471 - gmx:100810196 584.334