Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01102 ATGATTCCGAAGACTCCGTTACGGCACCTGTTATTCGCGTTAGGGTTTCTGCTTTGCACCACAATCCCCTCCGTTCGCGGCGAATCGTCAACGTGCTTGACGGTCTACAACAACGGCGGTGCTCCGGCAGTGTTCCAATCCCCAAAATGCCCCCGCTGGAAGCTCTCCGATTACGATTCCCCTCCCCAAACAACCGCGCGTTGCCAGACCTCCATGCTCCAGGGTCGCAGAAGCTCACAAGAGGATCGCGCTCTCTGCGTTCTCGATCTTCACATTCCCTTCCCTGGTGCGAACGGGATCAAGGATGTTGCGGTCGGGATTATGGCCGTTTTCGACGGTCATAACGGCGCAGAAGCTAGTGAGATGGCGTCGAAGCTCTTGGTGGAGTATTTCGTTCTGCATACTTATTTTCTTCTCGATGCCGCCTTTTCTGTTATTTCAAAGACGTCGACGGAATCATTGCTTCACAAGAGTGGCCGTGATCATGTAAACCTGCTGCTTAGATGGAAAGAGACTCTAGGTTGGGAATGGCATGAACTGCATTTTGAAAGGTTTCAGAATACATTTTCTCCAAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAGGAAGCATTGTTGAGAGCAGTCCATGACATTGATGCTAAATTTTCTGAGGAAGCTTCTAGAAATAATCTTCGCTCTGGATCTACAGCAACCATAGTTTTGGTAGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCTAAGGCCATCTTGTGCTCTGAAAATTTTCAGTCTCCTAGAGAGGCTAAAGACTCATTATTAAAGATATATAGGCAGAAAGAGCATGATGGTTCTGTTTCTGTGTGGGATCGTGAAAAGTACAGATTGGCTTCCTCCCATGGTCTCACTCATTTTGCAGTGAAGGAATTGACCAGTGATCATCATCCAGACAGAGATGATGAACGAATTCGGGTGGAAACAGCTGGTGGTCAAGTTCAAAATTGGGGTGGTGTCCCTCGCATAAATGGTCAGCTGGCTATTACACGGGCTATTGGTGATGTACCATTTAAAAGTTATGGTGTTATATCTGCACCGGAAGTGACTGATTGGCAGCCTCTGACTGCTAATGATAGCTATTTGGTGGTTGCATCTGATGGTGTATTTGAGAAGATGAGCGTGCAGGATGTCTGTGATTTGTTGTGGGAAGTACACCGTTTCAGTAACATGAGATCAGAGTGTACCCCTTCATCTTCCTATTCATTGGCAGATTTAATTGTTAATACTGCCTTCAAAAAGGGCAGTATGGACAACGTGGCAGCAGTTGTCATTCCTCTGGAGTCTGCCAAATCTTCTACAAACACGCTCAGGAGAAGCTATAACGGAAAGAGGGATGCCAGTGTCCAATCATTTGGTCTGCAGGAAATTGCATCCGGAAGCTCAGTTAATGACTTTGCTTCTGATCTTATGCAATTGGATCACCCTCATCTGGTAGATACCAAGCTTAAGCGAATATTGGTTGAAGTAAAAGATGGAGATTTTGGATGTTTTTATTTATCTGAAAATCTTGATGAACCAGAAGCCTCCAAGCAGATTGCCAAAAAAACTGACTGGGAAGACTATTTGTATGAACTACCTCAGCCTCTACCAGATGTCCATCAACAAATCACTTCAGGTGGTCATGTAAATTTATACAATAACCAAAACTTTTGCTTTCACCTTGGTCCAACTGTTAATGAAGCTGAAGACCAGTGCATAAATCCTGAAGGCTTTGCCAGTTTCATTGGTCTTCTTGAATCAATTCCTTTGCATGATACTGGCTCCAGTAATGGGTCTTCTGATTATTCAATGCCTGATTTAAGGTATGTGTTGAAGAAGAGTTTTGGACGTGGATCATATGGTGAAGTATGGTTGGCTTTTCATTGGAATTGTAATCAGGATAGTAATTCTTCAAAAATGAGCAAGGATGACAAAAATACAACCAGTAGCTCAACTGCTTCTGATTGTCAGGATGGTCCTTCTAACTACACCCTGTACATTTTGAAACGTATAATGGTAGAGAAGGGGTCTGCTGTTTACTTAAGTGGGCTGAGGGAGAAATACTTTGGAGAAATTTTCTTAAATGCCTCTACATTCTTTGAAGATCCACTATCAGCTGGAAAATCAAACCGTGTCTTGGAAACATCACAATTTGGTCCTGAGAATTCATTTCCAAACAAATTTCGGCTACAAAGAACCACATATGAAGATGGTTTGAACCATATTGCGAGATATGTGGAGTCTTTTGAGTCTCAAGCCAATGAAATATGGCTTGTATTTAGTTATGAAGGTGTATCATTGTCAAAACTTCTATATGCTGTGGAAGATTCATATGGTACTGCCGAGAAAGAAAGACTTGAGCAAGGTAAACATGTTCAGATACTACGTCCATCAAAGTGGTGGCATTGGTTGAAAACAACAGAAGAAGGGCAAGCGGAAATGCGCAACCTTATCTGGCAGCTGTTATTAGCTCTCAAGTCCTGTCATGATCGCAACATCACACATAGAGATATTAAACCTGAGAATATGGTGATATGCTTTGAAGATCAGGAGACAGGGAGATGCTTGAAAGAGATTCCCACTAAAGTTAATAATTTTTCCACCAAAATGCGTATTATTGACTTTGGAAGTGGAATTGATGAATTCACATTAAAGCATTTATATGGTTCCACTGGGCCTTCTAGAGCTGAACAAACCTATGAGTATACGCCTCCTGAAGCTTTGCTAAATGCTACATGGTATCAAGGGCCAACAAGCTCCACAATGAAATATGACATGTGGAGCGTTGGTGTTGTGATGCTAGAGTTGGTCTTAGGGACACCAAATGTTTTCCAGATAAATGCTTTAACACGTGCTCTTTTAGACAAACAACTAGAAGGATGGAATGAGGGCGTGAAAGAGCTGGCATACAAACTTAGAGCATTCATGGAATTGTGCATTTTGATCCCTGGGATCTCCCGGTCCAGCAGTTCATCAAAAGTCAACCAAGTTGGGGGTTCACCTGCATCTTGGAAATGCTCTGAAGAATTCTTTTCTCGTCAAATTAAGAATCGAGATCCCCTAAAAATAGGACTTGCAGTTTTTCAAACATCTGGGCTTTACGATTAG 3132 0.424 MIPKTPLRHLLFALGFLLCTTIPSVRGESSTCLTVYNNGGAPAVFQSPKCPRWKLSDYDSPPQTTARCQTSMLQGRRSSQEDRALCVLDLHIPFPGANGIKDVAVGIMAVFDGHNGAEASEMASKLLVEYFVLHTYFLLDAAFSVISKTSTESLLHKSGRDHVNLLLRWKETLGWEWHELHFERFQNTFSPNFDDSFHLEILKEALLRAVHDIDAKFSEEASRNNLRSGSTATIVLVADDKILVANIGDSKAILCSENFQSPREAKDSLLKIYRQKEHDGSVSVWDREKYRLASSHGLTHFAVKELTSDHHPDRDDERIRVETAGGQVQNWGGVPRINGQLAITRAIGDVPFKSYGVISAPEVTDWQPLTANDSYLVVASDGVFEKMSVQDVCDLLWEVHRFSNMRSECTPSSSYSLADLIVNTAFKKGSMDNVAAVVIPLESAKSSTNTLRRSYNGKRDASVQSFGLQEIASGSSVNDFASDLMQLDHPHLVDTKLKRILVEVKDGDFGCFYLSENLDEPEASKQIAKKTDWEDYLYELPQPLPDVHQQITSGGHVNLYNNQNFCFHLGPTVNEAEDQCINPEGFASFIGLLESIPLHDTGSSNGSSDYSMPDLRYVLKKSFGRGSYGEVWLAFHWNCNQDSNSSKMSKDDKNTTSSSTASDCQDGPSNYTLYILKRIMVEKGSAVYLSGLREKYFGEIFLNASTFFEDPLSAGKSNRVLETSQFGPENSFPNKFRLQRTTYEDGLNHIARYVESFESQANEIWLVFSYEGVSLSKLLYAVEDSYGTAEKERLEQGKHVQILRPSKWWHWLKTTEEGQAEMRNLIWQLLLALKSCHDRNITHRDIKPENMVICFEDQETGRCLKEIPTKVNNFSTKMRIIDFGSGIDEFTLKHLYGSTGPSRAEQTYEYTPPEALLNATWYQGPTSSTMKYDMWSVGVVMLELVLGTPNVFQINALTRALLDKQLEGWNEGVKELAYKLRAFMELCILIPGISRSSSSSKVNQVGGSPASWKCSEEFFSRQIKNRDPLKIGLAVFQTSGLYD 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01102 1043 ProSiteProfiles PPM-type phosphatase domain profile. 67 441 IPR001932 -
Cca02g01102 1043 PANTHER ALPHABET, ISOFORM E-RELATED 20 604 - -
Cca02g01102 1043 Gene3D Transferase(Phosphotransferase) domain 1 808 1030 - -
Cca02g01102 1043 Gene3D - 63 449 IPR036457 -
Cca02g01102 1043 SMART serkin_6 617 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01102 1043 Pfam Protein phosphatase 2C 200 434 IPR001932 -
Cca02g01102 1043 SUPERFAMILY Protein kinase-like (PK-like) 616 991 IPR011009 -
Cca02g01102 1043 CDD PP2Cc 74 441 IPR001932 -
Cca02g01102 1043 SMART PP2C_4 59 439 IPR001932 -
Cca02g01102 1043 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 20 604 - -
Cca02g01102 1043 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Cca02g01102 1043 Pfam Protein kinase domain 815 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01102 1043 ProSiteProfiles Protein kinase domain profile. 617 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01102 1043 MobiDBLite consensus disorder prediction 644 664 - -
Cca02g01102 1043 SUPERFAMILY PP2C-like 66 442 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01102 Cca-Chr2 28228276 28248568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01102 681 1033 PP2C-type Phosphatase Gene Family AT3G63340 62.606 2.51e-152 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Cca02g01102 Pkinase 9.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01102 - - gmx:100781476 1895.17