Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01089 ATGGGCCTTGAGCCCTTGCCGGATTCGGACGTGCCCGTGCCCATGCCCATGGCCAAGCTCCAGAGATCCGCCTCCGAGTCCAGAGTGTCCAGAGATctgcccctgcccctgccgctgccgcagccgcAGTGTCGCTTCTTCGACCCCAACAGTTTACCCAGGTCGCAGTCGCAGGGACCCAATGTGGTCCACGGGAATAATGATGGTGCCTTCCGCAGCCGATTGGACACTGGCAGAGGCGCAGGTGCAGGCGCAGATCCACCTAGGCACAGGGCGAAGAAGAGCTTCTACGACTCCGCTGATTTCTTCCCTGAGCCTAAACACACCGTCTCAGTCTACTCTGAGATTGAAAGAAGACTTCGGATGCGAGGGATTAACGAGCCTTCCAAGGACCTCCACACGCTCAAGCACATCCTCGAGGCCTTGCAGCTCAAGGGCCTTCTACATTCCAACAAACCCAACCAATCTCCTATTGTCCTCATGAAACCGGTTCGATCCCCTTCCCCTTCCCACTCCCACCGGAGCCCCCGAAGGAGCGAGATTGATCGGAATGCAAGGAATCAAGTCAGAGCACCCAACCGTAGGAAGCTCCCCAACCCCGAAACGCAGAGGAAAGTGGATTCCAGAAGGGTCTCCGTGTCTCCGGTTCATTCGCCTAAGGCCAGCCCCAGGAGGAATGCATATGCTAATGCAACCGGTGGATCCCCCAGGTTGAGAAAAAACATGGAGCGTAAGGCAGAGGATGAGTCCTCCACCGTTTCAGACAACAGCTTCAGCGCCTCCTCCTATCCCGATACAGAGAGGTACAGGATGGAAGAGTACAAGGAAGGGAAAGATCTGTTGGATAGGTGCGATAAGCTGCTGAACAGCATAGCAGAAATAACCGCGGCGAACGAGTTGCAACCGAGTCCAGTATCGGTGCTTGACTCGTCGTTTTACAAGGACGACTGGTGTTCACCATCCCCGATAACCAAACGCTGCATTGATTACAAAGATCAAGCGGCGGAATCAGAAGACGATGTGTGGAGTTCAGCATTGTGCAGCAGCGAGGAGGCAGCGTCGGAGGATAGCGATTTCGTTTACGTGTCGGAGATTCTGCGAGCTTGCAGTTACTTGCCGGAAGAGAGCGACGTTTTCCTCTTACTGGAGAAGCAGCAGTGTTTGAAGGGGAAGGACAGCTCGAAGGCGTCGACGCTGCAGAGGCGGTTGATATTCGACATACTCCAGGAGATCCTGAACCGGAAGCAGCAGTTGCCGCCGTGGAAGGCGGTGTCAGGCGGGGAGCAGAGGCAGCAGATCTGGTGGGAGTTCCAGAGGATCCGGGAGAGGGAGGAATCGGAGTCGGAGGACTTTTCAAAGGTGGTATGCGGGATGTTGAGGAAGGACATGGCGGAGGAGATGCGGGGGTGGGGAGAATGGCCGGTGGAGATGGGAGATGTGGTGTTGGACGTGGAACGTCTCGTGTTTAAAGATCTGGTTGGCGAAACCATTCGAGAACTCGCTTCCCTTTCCCCTCAACCTCAATGTAACAACCTACCCGCGCTTCGTAGGAAACTCCTCTTTTGA 1566 0.5415 MGLEPLPDSDVPVPMPMAKLQRSASESRVSRDLPLPLPLPQPQCRFFDPNSLPRSQSQGPNVVHGNNDGAFRSRLDTGRGAGAGADPPRHRAKKSFYDSADFFPEPKHTVSVYSEIERRLRMRGINEPSKDLHTLKHILEALQLKGLLHSNKPNQSPIVLMKPVRSPSPSHSHRSPRRSEIDRNARNQVRAPNRRKLPNPETQRKVDSRRVSVSPVHSPKASPRRNAYANATGGSPRLRKNMERKAEDESSTVSDNSFSASSYPDTERYRMEEYKEGKDLLDRCDKLLNSIAEITAANELQPSPVSVLDSSFYKDDWCSPSPITKRCIDYKDQAAESEDDVWSSALCSSEEAASEDSDFVYVSEILRACSYLPEESDVFLLLEKQQCLKGKDSSKASTLQRRLIFDILQEILNRKQQLPPWKAVSGGEQRQQIWWEFQRIREREESESEDFSKVVCGMLRKDMAEEMRGWGEWPVEMGDVVLDVERLVFKDLVGETIRELASLSPQPQCNNLPALRRKLLF 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01089 521 MobiDBLite consensus disorder prediction 48 64 - -
Cca02g01089 521 PANTHER OS11G0587300 PROTEIN 1 521 - -
Cca02g01089 521 MobiDBLite consensus disorder prediction 1 68 - -
Cca02g01089 521 PANTHER LONGIFOLIA PROTEIN 1 521 IPR033334 GO:0051513
Cca02g01089 521 Pfam Domain of unknown function (DUF4378) 358 495 IPR025486 -
Cca02g01089 521 MobiDBLite consensus disorder prediction 150 265 - -
Cca02g01089 521 MobiDBLite consensus disorder prediction 173 189 - -
Cca02g01089 521 MobiDBLite consensus disorder prediction 197 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01089 Cca-Chr2 27986272 27988976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01089 1 521 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 39.163 1.38e-91 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01089 - - ccaj:109813941 989.178