Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01080 ATGACAACTCTTTGCTTCTTTCGCTTCTGGCTTGGCTTTGGTATTGGTGGAGACTATCCACTTTCAGCAACCATAATGTCTAAGTATGCTAATAAGAAGACACGTGGTGCCTTTATAGCAGCAGTGTTTGCCATGCAAGGGTTTGGAATTTTGGCAGGAGGTGTGTTTGCAATTGTAATAGCATTTGTGTTCAAGACCAAGTTTAGTGCTCCACCCTATGAGGTTGATCCATTGGGGTCAACTGTTCCACAAGCAGACTATGTTTGGAGGATAATTCTGATGGCAGAAGCTAACACCATGAGCATGAGTGTCATGCCATAG 321 0.4361 MTTLCFFRFWLGFGIGGDYPLSATIMSKYANKKTRGAFIAAVFAMQGFGILAGGVFAIVIAFVFKTKFSAPPYEVDPLGSTVPQADYVWRIILMAEANTMSMSVMP 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01080 106 PANTHER PHOSPHATE TRANSPORTER 1 97 - -
Cca02g01080 106 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 97 - -
Cca02g01080 106 Gene3D MFS general substrate transporter like domains 1 105 IPR036259 -
Cca02g01080 106 SUPERFAMILY MFS general substrate transporter 2 63 IPR036259 -
Cca02g01080 106 Pfam Sugar (and other) transporter 3 64 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cca02g01080 106 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 106 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01080 Cca-Chr2 27861036 27861356 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01080 1 103 Inorganic Solute Cotransporters AT3G54700 77.670 4.15e-52 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01080 K08176 - gmx:100786638 184.882