Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01079 ATGGGGTTCTTCTTTATGACTGTCTTTATGTTTGCTCTTGCCATCCCCTATGATTATTGGACTCTTAAGGAGAACCGAATAGAGATTTTCCCAGCTAGATTTAGATCTACTTGCCATGGAATATCTTCAGCATCCGGGAAGCTTGGTGCTATGGTTGGGGCATTTGGATTTTTGTATTTGGCACAGAACCAGGACAAGAGCAAAACAGATGCAGGGTACCCTGCAGGTATCGGTGTGAAGAATTCACTGATTGTGTTAGGTGTTGTCAACATTTTAGGCTTCCTCTTTACTTTCTTGGTGCCTGAGGGGAAGGGTAGATCTTTGGAGGATATTTCTGGTGAGAATGAAGAAGTTCAAACCAATAAGGGTTAA 372 0.4247 MGFFFMTVFMFALAIPYDYWTLKENRIEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQNQDKSKTDAGYPAGIGVKNSLIVLGVVNILGFLFTFLVPEGKGRSLEDISGENEEVQTNKG 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01079 123 SUPERFAMILY MFS general substrate transporter 5 112 IPR036259 -
Cca02g01079 123 Pfam Sugar (and other) transporter 5 112 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cca02g01079 123 Gene3D MFS general substrate transporter like domains 1 123 IPR036259 -
Cca02g01079 123 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 28 120 - -
Cca02g01079 123 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 28 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01079 Cca-Chr2 27860300 27860759 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01079 1 117 Inorganic Solute Cotransporters AT3G54700 69.231 1.84e-62 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01079 K08176 - gmx:100786638 206.838