Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01074 ATGACAACTCTTTGCTTCTTCCGCTTCTGGCTTGGCTTTGGTATTGGTGGAGACTATCCACTTTCAGCAACCATAATGTCTGAGTATGCTAATAAGAAGACACGTGGTGCCTTTATAGCAGCAGTGTTTGCCATGCAAGGGTTTGGAATTTTGTTCAAGACCAAGTTTAGTGCTCCACCCTATGAGGTTGATCCATTGGGGTCAACTGTTCCACAAGCAGACTATGTTTGGAGGATAATTCTGATGGCAGGGGCACTTCCTGCTGCATTGACTTACTATTGGAGATTGAAGATGCCAGAAACTGCTCGCTACACTGCCTTAGTTGCCAAGAATATGGAGCAGGCTGCAACAGATATGTCTAAGGTTATGCAGGTGGAGATTCAAGTTGAGCCAGAAACTGAGGAGAAAGCACAAGGCCAGTATGGATTGTTATCAAAGGAGTTTCTTACTCGTCATGGACTGCATCTGCTTGGAACAACTAGCACCTGGTTCTTGCTTGACATTGCATTCTACAGCCAAAATCTGTTCCAAAAGGACATCTTCAGTGCAATTGGTTGGATCCCTTCTACAAAAACCATGAATGCTCTTGAGGAGGTTTTCAGAATTGCAAGGGCTCAAACTCTTATTGCTCTCTGCAGCACAGTTCCGGGTTACTGGTTTACTGTGGCTTTCATTGACAGGATAGGAAGATTTATCATTCAATTGATGGGGTTCTTCTTTATGACTGTCTTTATGTATACTCTTGCCATCCCCTATGATTATTGGACTCTTAAGGAGAACCGAATAGAGATTTTCCCAGCTAGATTTAGATCTACTTGCCATGGAATATCTTCAGCATCCGGGAAGCTTGGTGCTATGGTTGGGGCATTTGGATTTTTGTATTTGGCACAGAACCAGGACAAGAGCAAAACAGATGCAGGGTACCCTGCAGGTATCGGTGTGAAGAATTCACTAATTGTGTTAGGTGTTGTCAACATTTTAGGCTTCCTCTTTACTTTCTTGGTGCCTGAGGCGAAGGGTAGATCTTTAGAGGATATTTCTGGAGAAAAACCGCGGGAGTGCCAAAACGCCGTGGAGAGTTCCGAATCCAAGGGAGTAGTCGAGGCAGTTTCACTTCCGAATACTTCGAAGATTCCTGCGTTTGTCGAGGAGTGCCCGAGGTATGGGGTAACCTCGGTTTGTGGTCGGAGGAGGGACATGGAAGACGCCGTTTCGGTGCATCCCTCGTTTTGCCTCGAAAATCGTTCTCAGGATCAGAAAGGGTTTCATTTCTTCGCTGTTTTCGACGGTCACGGATGCTCGCATGTAAATAAATTAATAATTAAAAATATGAAATCTGTTTTGTTTTTCCTTTAG 1356 0.444 MTTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILFKTKFSAPPYEVDPLGSTVPQADYVWRIILMAGALPAALTYYWRLKMPETARYTALVAKNMEQAATDMSKVMQVEIQVEPETEEKAQGQYGLLSKEFLTRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPSTKTMNALEEVFRIARAQTLIALCSTVPGYWFTVAFIDRIGRFIIQLMGFFFMTVFMYTLAIPYDYWTLKENRIEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQNQDKSKTDAGYPAGIGVKNSLIVLGVVNILGFLFTFLVPEAKGRSLEDISGEKPRECQNAVESSESKGVVEAVSLPNTSKIPAFVEECPRYGVTSVCGRRRDMEDAVSVHPSFCLENRSQDQKGFHFFAVFDGHGCSHVNKLIIKNMKSVLFFL 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01074 451 Gene3D - 380 449 IPR036457 -
Cca02g01074 451 Pfam Sugar (and other) transporter 3 255 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cca02g01074 451 Pfam Sugar (and other) transporter 263 347 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cca02g01074 451 CDD MFS_PhT 1 339 - -
Cca02g01074 451 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 263 357 - -
Cca02g01074 451 Gene3D MFS general substrate transporter like domains 1 260 IPR036259 -
Cca02g01074 451 Gene3D MFS general substrate transporter like domains 261 364 IPR036259 -
Cca02g01074 451 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 1 257 - -
Cca02g01074 451 SUPERFAMILY MFS general substrate transporter 2 347 IPR036259 -
Cca02g01074 451 SUPERFAMILY PP2C-like 385 449 IPR036457 -
Cca02g01074 451 ProSitePatterns PPM-type phosphatase domain signature. 424 432 IPR000222 GO:0043169
Cca02g01074 451 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 263 357 - -
Cca02g01074 451 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 340 IPR020846 GO:0022857
Cca02g01074 451 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01074 Cca-Chr2 27780554 27788205 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01074 1 353 Inorganic Solute Cotransporters AT3G54700 73.402 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01074 K08176 - gmx:100786638 604.364