Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01063 ATGGAAGAGGTTGAGCAAGCTAATAGAGCTGCTGTTGAAAGCTGCCATAGGGTTCTGAGTTTGTTGTCTCAGCCCAGGGATCAGGTTCAGCATAGGAATTTAGTGGTGGAAACTGGAGAAGCTGTGGTGAGGTTCAAGAAGGTTGTTTCCTTGCTTCACAATGGTTTGGGTCATGCAAGGGTGAGGAAGGTTAAAAACCCTCAACCCCCCTTTTGCCAGAGAATCTTCCTAGACAACCCAAATTCTGGCAAAACCAACCATCTCTCTAAAAATCTGCAGTTTCCCCAAACCAGCTTTCATGACAATTCAATTCAGGAACTAGGTTCAACCATAAAAAATTCTCTCTCTCTTGGACAACCATCTTTGGAATTGAGCTCTAGTGGGAAAAGTCCTCTTAACCTCGCACAGCAGGGTTCATCAACTCACTATCACTTTTTTcagcagcagcagcagcaaaggttgttgctgcagcagcaacaacaacaacaactgaagcatcaagcagAAATGATGTTCCGAAGGAACAACAACAGTGGCATAAACCTGAATTTTGACAGCACTAGCTGCACACCAACAATGTCATCCACCAGGTCCTTTATTTCCTCCTTGAGCATAGATGGAAGCGTGGCTAACTTGGATGGAAGTTCCTTCCATTTAATAGGAGCTCCACACTCTTCTGATCAGAATTCGCAACAGCACAAGAGAAAATGTTCGGCCAGAGGTGATGAGGGCAGCCTGAAATGTGGGAGCAGTGCTAGATGCCATTGCTCTAAGAAGAGGAAACATAGAGTGAAGAGATCGATTAAGGTGCCTGCTATCAGCAACAAACTTGCAGATATCCCTCCTGATGATTATTCATGGAGGAAGTATGGCCAGAAACCAATCAAGGGCTCTCCTCACCCTAGGGGATATTATAAGTGCAGCAGCATGAGAGGGTGTCCTGCTAGGAAGCATGTTGAGAGATGCTTGGAAGAGCCTACCATGCTAATTGTTACCTATGAAGGCGAACATAACCACCCCAAGTTACCAACACAAACTGCAAATGCATGA 1050 0.421 MEEVEQANRAAVESCHRVLSLLSQPRDQVQHRNLVVETGEAVVRFKKVVSLLHNGLGHARVRKVKNPQPPFCQRIFLDNPNSGKTNHLSKNLQFPQTSFHDNSIQELGSTIKNSLSLGQPSLELSSSGKSPLNLAQQGSSTHYHFFQQQQQQRLLLQQQQQQQLKHQAEMMFRRNNNSGINLNFDSTSCTPTMSSTRSFISSLSIDGSVANLDGSSFHLIGAPHSSDQNSQQHKRKCSARGDEGSLKCGSSARCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKLPTQTANA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01063 349 MobiDBLite consensus disorder prediction 220 244 - -
Cca02g01063 349 Gene3D WRKY domain 268 343 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca02g01063 349 Pfam WRKY DNA -binding domain 283 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca02g01063 349 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 348 - -
Cca02g01063 349 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 348 IPR044810 GO:0003700
Cca02g01063 349 ProSiteProfiles WRKY domain profile. 276 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca02g01063 349 Pfam Plant zinc cluster domain 234 279 IPR018872 -
Cca02g01063 349 SUPERFAMILY WRKY DNA-binding domain 279 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca02g01063 349 SMART WRKY_cls 281 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01063 Cca-Chr2 27565410 27568653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01063 1 346 WRKY Transcription Factor Family AT2G30590 57.743 1.64e-126 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Cca02g01063 WRKY 4.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01063 - - gmx:100170681 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01063 02 27565410 27568653 Cca02g01063 02 27565410 27568653 ECH