Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01052 ATGGAACATGAAACCCTGGCTCTGCTGCTTTTTCTTTTGTTTGCAACTCTACTTTGGTACTTAGCCTCAACACTATCCAAATCCCCACCGACCTCTTCCACCGCCACCACAGCCATTCCCAAAGCTTATCCCATCCTGGGTTCCGTCTTCTCCATCGCCGCCAACAGCCACCGCCGCATCCACTGGATCGCCGACATTCTCCACGCCTCGCGCTCCTCCACCTACGTCCTCCACCGCGCCTTCGGCTCCCGCCAGGTCTTCACGGCCAACCCCACCGTCGTCCACCACATTCTCAAGACCAACTTCCCGGTCTACCAAAAGGGCCCCACGCTCAACCGCGCCCTCGGCGACTTCCTCGGCAACGGCATCTTCGCCGCCGACGGCTCCACCTGGAAGCTCCAGCGGCAAATCTCCAGCCACGAATTCAACACCCGCACCCTCCGGAAATTCGTCCAAACCGTGGTGGACACGGAACTCTCGGAGCGGCTCCTCCCCCTCCTGGCCGGCGCCGGAGCGGGAAACACCGTGGTGGACTTGCAAGACATCCTCCAACGGTTCACCTTCGACAACATCTGCAAAATCGCGTTCGGGTTCGACCCCGAGTACCTGCTCCCGTCGCTCCCGCAAACGGCCTTCGCGAGGGCCTTCGACGACGCGACCCGAATCAGCAGCGAGAGGTTCAACGCGGCGGTGCCTCTCTTCTGGAAAGTGAAAGAGGTGTTGAACGTAGGGTCGGAGAAGCGTCTGAGGGAAGCGATCTCGGAAGTGAGGGTTTTAGCGAGAAGAATCATCCGAGAGAAGAAAAAGGAGCTCGGCGAAAAGAAAACCCTAGATTCCGTGGATCTGTTGTCACGGTTTTTATCCTCTGGGCACTCGGATGAAGAATTGGTTATGGATATAATCATTAGCTTTATCCTGGCGGGGCGAGACACTACCTCGGCGGCCCTCACGTGGTTCTTCTGGCTCCTCTCTAACCACCCCCACGTGGAGGAGAACGTTGTTAAAGAAGTTAGGGATAAGTCTGAGGCTTACTCCCACGTCTATGACGAGGTGAAGGACATGGTTTACACGCACGCCGCCTTGTGCGAGACCATGCGCCTCTACCCCCCGGTTCCCGTCGACACTAAGGAGGCTGTGGACGACGACGTTTTGCCCGATGGGACTCTCGTCAAGAAAGGCTGGAGGGTTGCCTACCATATCTACGCCATGGGCAGGTCCGACAAGATATGGGGCTCCGATTCCGCCCAGTTTCGCCCCGAGAGGTGGCTGGCCTGGGATCAGCTGGAAGGCAAGTGGAGCCTCCAGGGGATCGATGCTTTTACCTATCCCGTCTTTCAGGCCGGCCCCAGGGTCTGTTTGGGTAGAGAAATGGCCTTCTTGCAGATGAAAAGACTCGTCGCCGCCATTTTGCAGCGCTTCACCCTCATCTCCAAGGTCGCCCAACCCGAGTATGGGGGCTACCTCACGTCTTTCATGATAGGTGGCTTCCCCGTCACCATTCAAAATCGCCACCCCcaatcaatcaatccaatcaatctataa 1542 0.5694 MEHETLALLLFLLFATLLWYLASTLSKSPPTSSTATTAIPKAYPILGSVFSIAANSHRRIHWIADILHASRSSTYVLHRAFGSRQVFTANPTVVHHILKTNFPVYQKGPTLNRALGDFLGNGIFAADGSTWKLQRQISSHEFNTRTLRKFVQTVVDTELSERLLPLLAGAGAGNTVVDLQDILQRFTFDNICKIAFGFDPEYLLPSLPQTAFARAFDDATRISSERFNAAVPLFWKVKEVLNVGSEKRLREAISEVRVLARRIIREKKKELGEKKTLDSVDLLSRFLSSGHSDEELVMDIIISFILAGRDTTSAALTWFFWLLSNHPHVEENVVKEVRDKSEAYSHVYDEVKDMVYTHAALCETMRLYPPVPVDTKEAVDDDVLPDGTLVKKGWRVAYHIYAMGRSDKIWGSDSAQFRPERWLAWDQLEGKWSLQGIDAFTYPVFQAGPRVCLGREMAFLQMKRLVAAILQRFTLISKVAQPEYGGYLTSFMIGGFPVTIQNRHPQSINPINL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01052 513 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 9 503 - -
Cca02g01052 513 PANTHER CYTOCHROME P450 9 503 - -
Cca02g01052 513 Gene3D Cytochrome P450 31 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01052 513 Pfam Cytochrome P450 40 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01052 513 SUPERFAMILY Cytochrome P450 40 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01052 513 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01052 513 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01052 513 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01052 513 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01052 513 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01052 513 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01052 513 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01052 513 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01052 513 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01052 Cca-Chr2 27383805 27385346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01052 4 504 Cytochrome P450 AT5G63450 45.437 1.22e-145 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01052 K20769 K20768 gmx:100781020 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01052 02 27383805 27385346 Cca02g01052 02 27383805 27385346 ECH
Cca03g02181 03 42420547 42422452 Cca02g01052 02 27383805 27385346 PCT