Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01037 ATGTCTAATAATGAATGTGCATTTGGGGTGATGTATGGGAAATACAAGCTTCACCTTATCATGGTTCTAGCTCAGGTGGCATCCTCGTTTCTCTATTTCCTACTTGAGGCTTCAATAAACAAAGGGTTGAACCCTCATGTCTTCGTTACTTATCGACATGCTGTTGGGGGCATAGTTGTGCTTCCTTTTGCTTATGTTCGTGAAAGAAAAGCATGGCCAAAGTTGACGATGACATTGTTCATGGAGCTATTTTTTCTTTCCCTCTTCGGGATCAGTCTTACCCTGAACATGTTTTTTGCAAGCTTGAAGTATACCACTCCTTCCTTTGTTGTATCCATGACTAACACAATCTCATCCCTTACTTTCATATTTGCAGTTGGACTCAGGCTAGAGGTTGTTAATGTGAAGAAGCCTTGTGGGCTGGCTAAAGTTTTTGGAACTGTATTATCATTGATTGGTGCCTTATTAATGACTTTGTATAAAGGGCATACGATAGAAAGCTTACAGGGTACCCCGTTCCATATCAGAGACAAATTGGTTCATATAAACTGGATTAAAGGATCAATTTTGTGTGTTGCAAGTTGTATATCATGGTCCTTATGGTACATACTACAGGCAATCATAGTGAAGAAATATCCTGCACAACTAACACTAACAGCATGGATAAATTGCATGGGTGCAGTGCAGTCTGCTGCCTTCACTGTACTCGTGCAACACAAGCCAACAGCATGGTTCATTACATCCACTGTTGAACTCTGTTGCATTTTGTATGCAGTAAGTAAAAGCATTAAGAGGCTGAAATTAAAAGAGATCACTTTAAAAACAAATTCCTGA 834 0.3957 MSNNECAFGVMYGKYKLHLIMVLAQVASSFLYFLLEASINKGLNPHVFVTYRHAVGGIVVLPFAYVRERKAWPKLTMTLFMELFFLSLFGISLTLNMFFASLKYTTPSFVVSMTNTISSLTFIFAVGLRLEVVNVKKPCGLAKVFGTVLSLIGALLMTLYKGHTIESLQGTPFHIRDKLVHINWIKGSILCVASCISWSLWYILQAIIVKKYPAQLTLTAWINCMGAVQSAAFTVLVQHKPTAWFITSTVELCCILYAVSKSIKRLKLKEITLKTNS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01037 277 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 162 - -
Cca02g01037 277 PANTHER WAT1-RELATED PROTEIN 11 258 IPR030184 GO:0016021|GO:0022857
Cca02g01037 277 PANTHER WAT1-RELATED PROTEIN 11 258 - -
Cca02g01037 277 Pfam EamA-like transporter family 20 158 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01037 Cca-Chr2 27159334 27162083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01037 16 258 Nodulin-like Gene Family AT5G07050 36.471 6.09e-51 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01037 - - ccaj:109812090 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01037 02 27159334 27162083 Cca02g01037 02 27159334 27162083 ECH