Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01025 ATGGGTCCCGGCGCCACGCAGTTCATCGTTATCTGCGTACCTTTCAGCTCCTTCGCCACGATCTTCCCCTTCGCCTCCACGCGCCGCCGAAAACGCCGTTCCCGATCCGAGAATACACTCTTCAAGACTCCCGAACTCGGCGCCTTGTTCGGCCTCTGGTACCTTCTCAACATCTACACTTCAATATTTATAACAAGCAGGTTCTATTCTCTCGCCAGATCTTTCGTTAAAACGTTTGTTCCTTCCAAACACGCCCTTGGATTTGTGTTAATTCATGGATACGTGTCGAAGGCGTATCATTTTCCGGTGACTGTGACTCTCACGCAGTTTTCCGTTGGGACTGTTATTGTGGTGTTAATGTGGGGTTTGAATCTGTACAAGAGGCTGAAACTCAGTGGTGCTATGCTTGGAGCGATTTTGCCGTTGGCTGCGGTGCATACTTTGGGGAATCTTTTCACTAATATGAGTCTTGGGAAGGTGGCTGTGTCTTTCACTCACACGATCAAGGCCATGGAGCCTTTCTTTTCGGTCGTCCTTTCTGCCATGTTCCTTGGAGAGTTTGAAACAGGGATTAGTGGGGAAATTATTGACAGGACACCCTATTCCATTGGTCCAAGACTGAAGGTATTCTCAGAATGGCTACTGAAATACATGGTTTCAGGTAACTTGGAAGCAATATTTCCAGCTGCTGCTTGTGAATATGCTCCACTGGTGGAAGAACTGTGGAGAGATGCAGCCATTCAGGCCACATATAGTAGGAGAAATGAAATAAAAAATTTACCAACAAATGCTAATTATTTTCTAGAGCGAGCTGTTGAAATTTCCAGCAAAGATTACGAACCCTTGGACATGGACATCTTGTATTCTGAGGGGATAACCTTATCCAATAGTCTTTCTTCTATGGAATTTTCATTTACTGTGTCAGGCCATGAAGACTCATTGGACCCTGCATATCAACATGATCCTTCACTCAGTGATAACAATCTTCAGCTTTTAAGTAATGCATAG 1008 0.4504 MGPGATQFIVICVPFSSFATIFPFASTRRRKRRSRSENTLFKTPELGALFGLWYLLNIYTSIFITSRFYSLARSFVKTFVPSKHALGFVLIHGYVSKAYHFPVTVTLTQFSVGTVIVVLMWGLNLYKRLKLSGAMLGAILPLAAVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVLSAMFLGEFETGISGEIIDRTPYSIGPRLKVFSEWLLKYMVSGNLEAIFPAAACEYAPLVEELWRDAAIQATYSRRNEIKNLPTNANYFLERAVEISSKDYEPLDMDILYSEGITLSNSLSSMEFSFTVSGHEDSLDPAYQHDPSLSDNNLQLLSNA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01025 335 SUPERFAMILY Transducin (alpha subunit), insertion domain 197 289 IPR011025 GO:0007165
Cca02g01025 335 Gene3D - 164 290 IPR011025 GO:0007165
Cca02g01025 335 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 195 324 - -
Cca02g01025 335 Pfam Triose-phosphate Transporter family 93 187 IPR004853 -
Cca02g01025 335 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 195 324 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01025 Cca-Chr2 27009443 27011801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01025 40 189 Antiporters AT5G33320 58.667 1.78e-47 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01025 - - gmx:100791124 226.098