Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01019 ATGGTGATAACATTATGCATAGCACTTGACAGAGAGCTTGGGCATTTCCGTCCTCACCAAAACCCTACCGTTCATCGCCGTGTTCTCCAGCTTCGGCAACCCCATGCGCTTGCATTCTTCTTCACCAAGGGAATCATCAAGATCGGCCTCGAAAATCGTGACGCGTACCAGTTCGTGAAGCTCTTCGGTAGCTCCTCGCTAGGGTTAGGTTACAACTTGGTCTTCAGCGAAGCATTGCTGGTGCCAATGATTCCCTCGATGTCGGCGAGGGCGGGGGGATTTTCCTGCCGCTGGTTAAGGCGCTCTACGTGGCGTGCAGGAGCAACGCCAATGACGGGATGGAGAACAGGTTGGGGGCGTGGCTGA 366 0.5492 MVITLCIALDRELGHFRPHQNPTVHRRVLQLRQPHALAFFFTKGIIKIGLENRDAYQFVKLFGSSSLGLGYNLVFSEALLVPMIPSMSARAGGFSCRWLRRSTWRAGATPMTGWRTGWGRG 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01019 121 Pfam Sodium:sulfate symporter transmembrane region 37 93 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cca02g01019 121 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 36 94 IPR030676 -
Cca02g01019 121 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 36 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01019 Cca-Chr2 26872741 26873455 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01019 36 93 Antiporters AT5G12860 81.034 1.21e-23 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01019 - - gmx:100793559 96.2857