Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01016 ATGGGGAAGGAGGTGCTGAATGCCCTGGACGTAGCAAAAACACAATGGTATCACTTCACTGCAATCATCGTGGCTGGAATGGGCTTCTTCACCGACGCATATGATCTCTTCTGCATATCACTCGTGACAAAGCTTCTAGGGCGCATATACTACCACGTTGAAGGGTCACCAAAGCCTGGCACGTTGCCTCCACACGTGTCAGCCGCCGTCAACGGCGTAGCTTTCGTCGGAACCCTTTCTGGGCAACTCTTCTTTGGCTGGCTCGGTGACAAATTGGGCCGAAAAAAAGTGTATGGCATGACACTCATGCTCATGGTGATAGCTTCCATTGCTTCGGGTCTTTCCTTCGGACACGACGCAAAGACTGTGATGGCAACTCTTTGCTTCTTCCGCTTCTGGCTTGGCTTCGGCATTGGTGGAGACTACCCTCTTTCCGCCACCATAATGTCTGAGTACGCTAATAAGAAGACACGTGGCGCATTTATAGCAGCGGTGTTCGCCATGCAAGGGTTTGGAATTTTGGCGGGAGGTGTGTTTGCGATTGTGATAGCATCTGCATTCAAAGCTAGGTTTAGTGCTGAACCCTACGAGGTTGACCCATTGGGGTCAACTGTTCCACAAGCTGACTATGTTTGGAGGATTATTCTAATGGCGGGAGCAGTTCCTGCTGCGTTGACTTACTATTGGAGGTTGAAGATGCCAGAAACTGCACGCTACACTGCTTTAGTTGCAAAGAATATGGAGCAAGCTGCAGCGGATATGTCTAAGGTTATGCACGTGGAGATTCGAGCTGAGACAAAAATGGAGGAGAAAGCACAAGGAAAATCGTATGGATTGTTCTCCAAGGAGTTTTTTACTCGTCATGGACTTCATCTGCTTGGAACAACTACCACGTGGTTCTTGCTTGATGTTGCATTCTACAGCCAGAATCTCTTCCAGAAGGATATCTTCAGTGCAATTGGATGGATTCCTCATGCAAAAACCATGAATGCTCTTGAGGAGGTTTTCAGAATTGCTAGGGCTCAAACTCTTATTGCTCTTTGCAGCACAGTTCCGGGTTACTGGTTCACTGTGGCCTTCATTGACAAGATAGGGAGATTTTCGATTCAATTGATGGGGTTCTTCTTTATGACTGTTTTTATGTTTGCTCTTGCCATTCCCTATGATCATTGGACTCATAAGGAGAATCGAATAGGGTTTGTGGTTTTGTACTCTCTCACCTTCTTCTTTGCGAACTTTGGGCCTAATGCTACCACATTTGTTGTGCCAGCGGAGATTTTCCCTGCTAGGTTTAGATCAACTTGCCATGGAATATCTTCAGCATCGGGGAAGCTTGGGGCTATGGTTGGTGCATTTGGTTTTTTGTATTTGGCTCAGAACCAGGACAAGAGTAAAACAGATGCGGGGTACCCTGCAGGTATTGGTGTGAGGAATTCGTTGCTTGTGTTAGGTTTTGTTAACATCTTGGGCTTCATGTTCACTTTCTTGGTGCCTGAGGCGAAGGGTAGATCCTTAGAGGATATTTCTGGTGAGAATGAAGAAGTTGAAACCAATAAGGTGTAA 1563 0.4658 MGKEVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVEGSPKPGTLPPHVSAAVNGVAFVGTLSGQLFFGWLGDKLGRKKVYGMTLMLMVIASIASGLSFGHDAKTVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGVFAIVIASAFKARFSAEPYEVDPLGSTVPQADYVWRIILMAGAVPAALTYYWRLKMPETARYTALVAKNMEQAAADMSKVMHVEIRAETKMEEKAQGKSYGLFSKEFFTRHGLHLLGTTTTWFLLDVAFYSQNLFQKDIFSAIGWIPHAKTMNALEEVFRIARAQTLIALCSTVPGYWFTVAFIDKIGRFSIQLMGFFFMTVFMFALAIPYDHWTHKENRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQNQDKSKTDAGYPAGIGVRNSLLVLGFVNILGFMFTFLVPEAKGRSLEDISGENEEVETNKV 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01016 520 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 4 514 - -
Cca02g01016 520 SUPERFAMILY MFS general substrate transporter 9 509 IPR036259 -
Cca02g01016 520 TIGRFAM 2A0109: phosphate:H+ symporter 8 511 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cca02g01016 520 Gene3D MFS general substrate transporter like domains 17 520 IPR036259 -
Cca02g01016 520 Coils Coil 505 520 - -
Cca02g01016 520 CDD MFS_PhT 22 501 - -
Cca02g01016 520 Pfam Sugar (and other) transporter 23 509 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cca02g01016 520 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 4 514 - -
Cca02g01016 520 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 502 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01016 Cca-Chr2 26766345 26770668 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01016 4 510 Inorganic Solute Cotransporters AT2G38940 83.922 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01016 K08176 - gmx:100786638 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01016 02 26766345 26770668 Cca02g01016 02 26766345 26770668 ECH
Cca02g01016 02 26766345 26770668 Cca03g02203 03 42811925 42814458 PCT