Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01015 ATGGGGAAGGAGCAAGTTCAGGTGCTAAATGCCCTGGACGTGGCAAAAACACAATGGTATCATTTCACCGCAATCATCGTTGCTGGAATGGGCTTCTTCACTGATGCCTATGACCTGTTCTGCATATCACTTGTGACAAAGCTTCTAGGGCGCATATACTACCACGTTGATGGGGCAGAAAAGCCTGGTTCATTGCCTCCCAATGTGTCAGCTGCTGTTAACGGTGTAGCTTTTGTTGGAACATTTTCTGGCCAACTCTTCTTTGGTTGGCTCGGTGACAAAATGGGACGAAAAAAGGTGTATGGCATGACACTCATGCTCATGGTGTTAGCTTCCATTGCTTCAGGTCTTTCATTCGGACATGATCCAAAGACTGTGATGACAACTCTTTGCTTCTTCCGCTTCTGGCTTGGCTTTGGTATTGGTGGAGACTATCCACTTTCAGCAACCATAATGTCTGAGTATGCTAATAAGAAGACACGTGGTGCCTTTATAGCAGCAGTGTTTGCCATGCAAGGGTTTGGAATTTTGGCAGGAGGTGTGTTTGCAATTGTAATATCATCTGTGTTCAAGACCAAGTTTAGTGCTCCACCCTATGAGGTTGATCCATTGGGGTCAACTGTTCCACAAGCAGACTATGTTTGGAGGATAATTCTGATGGCAGGAGCACTTCCTGCTGCATTGACTTACTATTGGAGATTGAAGATGCCAGAAACTGCTCGCTACACTGCCTTGGTTGCCAAGAATATGGAGCAGGCTGCAGCAGATATGTCTAAGGTTATGCAGGTGGAGATTCAAGCTGAGCCAAAAACTGAGGAGAAAGCACAAGGCCAATCGTATGGATTGTTATCAAAGGAGTTTCTTACTCGTCATGGACTGCACCTGCTTGGAACAACTAGCACCTGGTTCTTGCTTGACATTGCATTCTACAGCCAAAATCTGTTCCAAAAGGATATCTTCAGTGCAATTGGTTGGATCCCTTCTGCAAAAACCATGAATGCTCTTGAGGAGGTTTTCAGAATTGGAAGGGCTCAAACTCTTATTGCTCTCTGCAGCACAGTTCCGGGTTACTGGTTTACTGTGGGTTTCATAGACAGGATAGGAAGATTTAACATTCAATTGATGGGGTTCTTCTTTATGACTGTCTTTATGTTTGCTCTTGCCATCCCCTATGATTATTGGACTCATAAGGAGAACCGAATAGGATTTGTGGTTTTGTACTCTCTCACCTTCTTCTTTGCAAACTTTGGGCCTAATGCTACCACATTTGTTGTGCCAGCAGAGATTTTCCCAGCTAGATTTAGATCTACTTGCCATGGAATATCTTCAGCATCCGGGAAGCTTGGTGCTATGGTTGGGGCATTTGGATTTTTGTATTTGGCACAGAACCAGGACAAGAGCAAAACAGATGCAGGGTACCCTGCAGGTATCGGTGTGAAGAATTCACTCATTATGTTAGGTGTTGTCAACATTTTAGGCTTCCTCTTTACTTTCTTGGTGCCTGAGGCCAAGGGTAGATCTTTGGAGGAGATTTCTGGTGAGAATGAAGAA 1551 0.4455 MGKEQVQVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFVGTFSGQLFFGWLGDKMGRKKVYGMTLMLMVLASIASGLSFGHDPKTVMTTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGVFAIVISSVFKTKFSAPPYEVDPLGSTVPQADYVWRIILMAGALPAALTYYWRLKMPETARYTALVAKNMEQAAADMSKVMQVEIQAEPKTEEKAQGQSYGLLSKEFLTRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPSAKTMNALEEVFRIGRAQTLIALCSTVPGYWFTVGFIDRIGRFNIQLMGFFFMTVFMFALAIPYDYWTHKENRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQNQDKSKTDAGYPAGIGVKNSLIMLGVVNILGFLFTFLVPEAKGRSLEEISGENEE 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01015 517 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 517 - -
Cca02g01015 517 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 1 517 - -
Cca02g01015 517 Pfam Sugar (and other) transporter 26 512 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cca02g01015 517 Gene3D MFS general substrate transporter like domains 20 517 IPR036259 -
Cca02g01015 517 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 505 IPR020846 GO:0022857
Cca02g01015 517 CDD MFS_PhT 25 504 - -
Cca02g01015 517 SUPERFAMILY MFS general substrate transporter 12 512 IPR036259 -
Cca02g01015 517 TIGRFAM 2A0109: phosphate:H+ symporter 11 514 IPR004738 GO:0005315|GO:0006817|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01015 Cca-Chr2 26749384 26750934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01015 1 517 Inorganic Solute Cotransporters AT3G54700 83.977 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01015 K08176 - gmx:100786638 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01015 02 26749384 26750934 Cca02g01015 02 26749384 26750934 ECH