Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00995 ATGAACAAATCCCTCTCCAATGGCGGTTGCACTCGCACACTCACAACAATGGCGCCAGAGCAAGAAGATTCCCGCGGAATCCGCGTCAACGCCATGCAATTCTCCTACGACGTGCAGCAACCGCCGCTGTTCCTCGACTTCAGCCTCGACGTCGAACCCGGATCGCGCTGCCTCCTCGTCGGCGCCAACGGATCCGGGAAGACGACTTTGCTGAAGATTCTGGCGGGGAAGCACATGGTTGGAGGAAGAGACGTGGTGCGCGTGCTCAACGGTTCAGCCTTTCATGACACTCAACTCGTTTGTAGCGGCGATCTCGCTTACTTGGGCGGATCCTGGAGCAAAAACGTTGGCTCCGCTGGAGAAATTCCGCTCCAAGGAGACTTCTCTGCAGAACATATGATCTTTGGAGTTGAGGGCGCTGATCCTGATAGGAGAGATAAGTTAATCGATCTGCTTGATATCGATCTGCAGTGGCGAATGCATAAGGTATCCGATGGGCAGCGGCGTCGAGTGCAAATTTGTCTTGGTCTTCTTTATCCATATAAGGTTCTCTTGCTGGATGAGGTTACTGTTGATCTGGATGTTGTTACCCGGATGGATTTATTGGACTTCTTTAGGGAAGAATGTGAACAGAGAGAAGCTACAATCGTATATGCAACTCATATTTTTGATGGACTAGAGACGTGGGCAACTCATTTGGCATACATACAAGATGGTGAACTGAGAAGAGCTGAAAAATTATCAGATGTTAACGAGTTGAAATCTACAACTAATCTGCTGTCTGTTGTTGAGTCCTGGCTCCGTGCTGAAACAAAGCTTGAAAAGAAGAACCCTGTCCAAAAGACTTCTTTTGCTAGTTCTCCATTCTTTTCATCCAGACACATGGCGTACTATCGATAG 900 0.4867 MNKSLSNGGCTRTLTTMAPEQEDSRGIRVNAMQFSYDVQQPPLFLDFSLDVEPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFHDTQLVCSGDLAYLGGSWSKNVGSAGEIPLQGDFSAEHMIFGVEGADPDRRDKLIDLLDIDLQWRMHKVSDGQRRRVQICLGLLYPYKVLLLDEVTVDLDVVTRMDLLDFFREECEQREATIVYATHIFDGLETWATHLAYIQDGELRRAEKLSDVNELKSTTNLLSVVESWLRAETKLEKKNPVQKTSFASSPFFSSRHMAYYR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00995 299 Gene3D - 24 282 IPR027417 -
Cca02g00995 299 PANTHER ABC TRANSPORTER I FAMILY MEMBER 21 24 299 - -
Cca02g00995 299 SMART AAA_5 53 240 IPR003593 -
Cca02g00995 299 Pfam ABC transporter 46 190 IPR003439 GO:0005524
Cca02g00995 299 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 24 299 - -
Cca02g00995 299 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 27 263 IPR003439 GO:0005524
Cca02g00995 299 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 252 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00995 Cca-Chr2 26272425 26276315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00995 19 255 Calmodulin-binding Proteins AT2G36910 24.111 2.85e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00995 K12608 - gmx:100788503 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00995 02 26272425 26276315 Cca02g00995 02 26272425 26276315 ECH