Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00991 ATGGAGCATGTGATTGGTGGAAAGTTTAAATTGGGAAGAAAAATTGGGAGTGGGTCTTTTGGGGAGCTCTATTTAGGGGTTAATGTACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAACCTGTGAAAACCAGGCATCCACAGCTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCACCTCAAGTGGTTTGGAGTTGAGGGAGACTACAATGTCATGGTTATTGACCTTCTTGGACCAAGCCTGGAAGATTTATTCAATTATTGTAACCGAAAGTTCTCATTGAAGACAGTGTTAATGCTTGCTGATCAATTGATTAACAGAGTTGAATATATGCATTCAAGAGGTTTCCTTCACCGCGACATAAAGCCGGACAATTTTCTAATGGGTCTAGGACGAAAAGCAAATCAAGTGTATGCCATAGACTATGGCCTTGCAAAAAAATATAGGGATCTTCAGACTCATAGGCACATACCATACAGGTTGTCGTATTTGTTTTCATTGTGTGGGGAAAACAAGAACCTTACTGGCACAGCACGCTATGCAAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTTATGTATTTCTTAAGAGGAAGtcttCCCTGGCAAGGACTGAAGGCTGGCACTAAAAAACAAAAATATGATAAAATCAGTGAGACAAAAGTGTCAACTCCCATAGAGGTTCTATGCAAATCATATCCCTCCGAGTTTGTATCATACTTCCATTATTGCCGATCATTGCGGTTTGAGGACAAGCCAGATTACTCGTACTTAAAGAGACTTTTCCGAGACCTATTTATTCGAGAAGGCTATCAGTTTGACTACATTTTTGACTGGACTATGTTGAAGTATCCACAGATTGGTGGCACCTCTAGAGGGCGACATGGCACTGGCAAGGCAGCTATGCATGCAGGTCCACATGTACAAAAACAAGAAAAGATCTCAGTTGGGAAAGAGATAAGAGAGAAATTCTCTGGTGCAGTTGAAGCATTCTCCCGGAGGAACCCTGCAAATGCAAGTCCTCGTCCTGATCACACCAAACATAGGAGTTTTGATGATGTACCAGTACAAAAGGATTTGCACTATGCCCAACACAACCCCGCTCGTTATGGCAGCACTTCAAGAAGACCCATGATCTCATCAAACAAGCAGACTTCCTCTGGTGACCATACCGGCAGGCCAACCTTAAGTGGTGGCCGTCCATCTGGTGCTCATAGAATTCAACCTGTATATGACACCAAACAAGCAACTTACACACGCAGTGGCTCTATAATAAGAGGCCACCGTGATGATCCTCTTAGGAGCTTTGAGCTCCTCAATATCAGAAATTTTGGACCAAGGTGGACTTTTTTCTGCCCCAGAATTGCTTCAGAAGCCTTCACCTCTGCGCGTTCATTAATCACTTCCCAAATCGCTAAGAAATTGATGAGTGGTGGAGCTACTGAGTTGAATACCTTTTACCCCATTAAACCAGAATGCGTAGCCGATGTTCCAGCCACTCGTTTTAAACCAAGGGCTGGCAAAACTCTAAGTCAAAGAAGATGGCATGCATCATTCTCTGAAGATGGTCACTTGGATATTGCAAAAGTGCTAAGACGAATTCAGCGAGGGGGTGTCCATCCTTCAATCAAAGGAGAAGTTTGGGAGTTCTTGCTAGGTTGCTATGATCCTAACAGTACACTTGAAGAACGGAATGAGCTCAAGCAACGCAGGAGGGGGCAGTATGATATGTGGAAAGCTGAATGTCAAAGGATGGTCCCAGTCATTGGTACTGGAAAATTTATTACTACACCCCTCTTTGATGATGATGGTCGGCCAACAGATCCTTCTTTGGTAGGCATCCAGACTTCAGATAAGAAAGTTTTGCAGTGGATGCAGTTATTACATCAGATTGGTCTGGATGTTGTTCGAACAGATCGAGCACTTGTCTTTTATGAGACTGAAGTTAATCAAGCAAAACTCTGGGATGTTCTATCCGTTTATGCTTGGTTGGACAATGATATTGGTTATGTACAAGGAATGAATGATATTTGTTCACCTTTGATTATGCTTATTGAGAATGAAGCAGATTGCTACTGGTGCTTTGACCGTGCAATGCGAAGGATGAGAGAGAACTTCAGGTGCAATGAAAGTTCAATGGGGGTCCAATCTCAGTTGGGTGTACTCTCACAGATAATAAAAACAGTTGATCCCAAGCTTCACCATCACCTCGAGGATTTAGATGGAGGAGAATATCTCTTTGCATTTCGCATGCTTATGGTTCTTTTCCGAAGAGAATTTTCTTTTGCAGATACCTTGTATCTTTGGGAGTTGATGTGGGCCATGGAATACAACCCAAACATCTTCCAAAAATATGAGGATCCAGATAAAGCAAAAGGCCCCTCACCTCCAAATGACAAACTTTTAAAGCAATATGGAAAATTTGAGAGAAAAAATGTGAAGACTGGGCATAGAGAGGAAACTAGTGCACTGTCTGTTTTTCTTGTTGCAAGTGTTCTTGAGATCAAGAATAGGCGGATTTTAAACGAGGCCAAGGGTGTGGACGATGTTGTTAAGATCTTGGGTGACATAACCTCAAATCTTGATGCTAAAAAAGCATGTACTGAAGCACTGAAACTTCAGAAAAAATACCTGAGCAAGGCAAAGAAGGCATGA 2715 0.4239 MEHVIGGKFKLGRKIGSGSFGELYLGVNVQTGEEVAVKLEPVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYAIDYGLAKKYRDLQTHRHIPYRLSYLFSLCGENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISETKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYIFDWTMLKYPQIGGTSRGRHGTGKAAMHAGPHVQKQEKISVGKEIREKFSGAVEAFSRRNPANASPRPDHTKHRSFDDVPVQKDLHYAQHNPARYGSTSRRPMISSNKQTSSGDHTGRPTLSGGRPSGAHRIQPVYDTKQATYTRSGSIIRGHRDDPLRSFELLNIRNFGPRWTFFCPRIASEAFTSARSLITSQIAKKLMSGGATELNTFYPIKPECVADVPATRFKPRAGKTLSQRRWHASFSEDGHLDIAKVLRRIQRGGVHPSIKGEVWEFLLGCYDPNSTLEERNELKQRRRGQYDMWKAECQRMVPVIGTGKFITTPLFDDDGRPTDPSLVGIQTSDKKVLQWMQLLHQIGLDVVRTDRALVFYETEVNQAKLWDVLSVYAWLDNDIGYVQGMNDICSPLIMLIENEADCYWCFDRAMRRMRENFRCNESSMGVQSQLGVLSQIIKTVDPKLHHHLEDLDGGEYLFAFRMLMVLFRREFSFADTLYLWELMWAMEYNPNIFQKYEDPDKAKGPSPPNDKLLKQYGKFERKNVKTGHREETSALSVFLVASVLEIKNRRILNEAKGVDDVVKILGDITSNLDAKKACTEALKLQKKYLSKAKKA 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00991 904 MobiDBLite consensus disorder prediction 347 428 - -
Cca02g00991 904 CDD STKc_CK1_delta_epsilon 8 291 - -
Cca02g00991 904 SMART serkin_6 9 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00991 904 ProSiteProfiles TBC/rab GAP domain profile. 558 796 IPR000195 -
Cca02g00991 904 Gene3D - 732 904 - -
Cca02g00991 904 Pfam Rab-GTPase-TBC domain 637 797 IPR000195 -
Cca02g00991 904 MobiDBLite consensus disorder prediction 360 379 - -
Cca02g00991 904 MobiDBLite consensus disorder prediction 310 333 - -
Cca02g00991 904 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Cca02g00991 904 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 535 756 IPR035969 -
Cca02g00991 904 Gene3D Transferase(Phosphotransferase) domain 1 1 345 - -
Cca02g00991 904 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 634 726 - -
Cca02g00991 904 SUPERFAMILY Protein kinase-like (PK-like) 5 299 IPR011009 -
Cca02g00991 904 ProSiteProfiles Protein kinase domain profile. 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00991 904 PANTHER CASEIN KINASE-RELATED 1 450 - -
Cca02g00991 904 Pfam Protein kinase domain 10 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00991 904 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 450 - -
Cca02g00991 904 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 734 897 IPR035969 -
Cca02g00991 904 SMART tbc_4 555 825 IPR000195 -
Cca02g00991 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Cca02g00991 904 MobiDBLite consensus disorder prediction 387 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00991 Cca-Chr2 26219922 26240791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00991 5 228 EF-hand Containing Proteins AT3G50530 26.877 2.49e-12 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Cca02g00991 Pkinase 1.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00991 K08960 - gmx:100789031 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00991 02 26219922 26240791 Cca02g00991 02 26219922 26240791 ECH
Cca03g02222 03 43024754 43030846 Cca02g00991 02 26219922 26240791 PCT