Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00983 ATGGCTATGACTTCAGCCTCAACCACTGGCTCTCACTCCCGAAATCGATTCCGTTTCTCGGACGAGGAAAATGGAGACTATAATCAACACATTGGTGGTCAAGCATTCTCTGTGGCTGGAAGTGTTGCTAGTGGTTTTGAAGGGCAGGAAGCATTCTATGGGAATGCAGATAAACGGAAAGAAAAGAGAAGTTTAATGAGCAATGACCAAGGAGAAGATGACTACCTTTTGGCTGAGGGAAGGCAACCACTGTGGCGCAAAGTTCCAATAGCTTCAAGCTTAATCAACCCTTATCGCATAGTCATAATCATGCGTCTCGTTATCCTAGTTTTCTTCTTCCACTTGCGCATCACAACTCCAGTTCATGATGCACTTGCCTTGTGGATAATCTCTGTAGTCTGTGAAATCTGGCTTGCACTATCTTGGATAGTTGACCAACTCCCCAAGTGGTTCCCCATTACTCGTGAAACTTACCTTGAACGTTTGTCCATAAGGTTTGAACGTGAAGGGGAGCCAAACCTTCTAGCACCGGTTGATATCTTTGTGACCACTGCAGACCCTTTGAAGGAACCACCTATTGTAACTGCAAACACGGTTCTATCAGTGTTGTCTGTTGATTATCCTGTTGAGAAGGTTAGCTGCTATGTCTCAGATGACAGTGCATCTATGCTTCTCTTTGATACCTTGTCAGAAACTGCTGAGTTTGCCAGAATATGGGTTCCTTTTTGTAACAAGTATAACATTGAGCCAAGGGCACCTGAGTTTTATTTCTCTGAGAAACTTGATTACTTGAAAGATAAGGTGCACCCCACGTTTGTTAAGGATCGCAGGGCCATGAAGAGAGAGTATGAAGAATTCAAGGTGAAAATTAATGTGTTGGTTGCAAAGGCTCAGAAAAAACCAGAAGAGGGGTGGGTGATGCAAGATGGTAATCCATGGCCTGGGAACAACATTGACGATCATCCAGGAATGATTCAGGTATGTCTAGGAAGTGCTGGTGCACTGGACAAGGAAGGCAAGGCACTGCCAAGGCTTGTGTATATTTCAAGGGAAAAACGTCCTGGCTATCAACACCACAGAAAAGCTGGTGCCATGAATGCTCTGGTGCGAGTTTCTGCTGTGCTTAGTAATGCACCTTTTGCATTGAATCTGGATTGTGACCAATACATCAATAATAGCAAGGTTCTTAGGGAGGCTATGTGCTTTTTAATGGACCCTCAACTTGGAAAGAAGTTCTGTTATGTCCAATTTCCACGAAGGTTTGATGGCATCGACTGCAATGACAGATATGCTAATCACAATACTGTATTCTTTGATATCAACATGAAATGCCTTGATGGGATTCAAGGGCCTATGTATGTTGGTACTGGATGTGTGTTCAACAGGCAGGCATTATATGGCTATGAGCCACCTTCTGAGAAAAGGCCAAAGATGAAAAGTTGCTGCTGGCCTTCATGCTGCAGCTCTTGTTCTGGTGACTCTCAGTCCACATCTGATGTTGAAGAGAGTGATCAAGAGCTTGAAGACTTTGATGAGGAAGAGGAATTATCATTCATGTCCCTGAAAAATTTAGAGAAACGATTTGGACAATCACCAGTTTTCATTGATTCTGCTTTGATGGAAGATGGTGGACTTCCGAAAGGCACCAACACCCGATTACTGATTAAGGAAGCAGTTCATGTAATAAGCTGTGACTATGAAGAGAAAACTGAATGGGGAAAAGAGATTGGGTGGCTTTATGGCTCAGTCACAGAAGACATCTTAACTGGGTTTAACATGCATTGTAAAGGATGGAAATCAGTGTACTGCATGCCAAAGAAAGCAGCTTTTAAGGGATCTGCTCCTATAAATCTATCAGACCGATTACATCAAGTTCTGAAATGGGCTTCAGGTTCTACTCAGATTTTCTTTAGTGGCTATTGCCCTTTGTGGTATGGCTATAGTGGAAAACTCAAATGCTTACAGAGGTTGGCCTACACCAATTCCATTGTCTATCCATTCACTTCCATCCCTCTGCTGGTCTACTGTACAGTTCCAGCTGTCTGTCTTCTGACTGGAAAGTTCATCATCCCCACTCTGTCAAACCTTGCTAGCATTTGGTTAATGGCCTTATTCATCTCCATCATCTTAACCTGTGTGCTAGAGCTTCGTTGGAGTGGGGTTAGCATTCAGGACTGGTGGCGCAATGAGCAATTCTGGGTCATTGGGGGTGTTTCTGCACACCTTTTTGCTGTATTTCAAGGTCTCCTTAAAGTTGCTGGAGTAGACACTAATTTCACTGTGAGAGCAAAATCAGCAAATGACACTTCTTTTGGACAGCTCTATCTCTTCAAGTGGACTACTCTTTTCATCCCTCCAACCAGTCTTGTAATCTTAAATATGGTGGGAATCGTGGCTGGAATCTCTGATGCCATTAACAATGGCTATGACTCATGGGGACCTTTCTTTGGGAAGCTATTCTTCTCTTTGTGGGTCATTGTGCACTTATATCCTTTCCTCAAAGGTCTAATGGGAAGGCAAAACAGAACCCCTACCATTGTAGTCCTTTGGTCAATACTTACAGCGATAATTTTCTCAATGATTTGGGTGCGACTTGATATTTTCTTGCCCAAAGAAAGAGGTCCAGTACTCAAACAGTGTGGCATAAAATGCTAA 2655 0.4316 MAMTSASTTGSHSRNRFRFSDEENGDYNQHIGGQAFSVAGSVASGFEGQEAFYGNADKRKEKRSLMSNDQGEDDYLLAEGRQPLWRKVPIASSLINPYRIVIIMRLVILVFFFHLRITTPVHDALALWIISVVCEIWLALSWIVDQLPKWFPITRETYLERLSIRFEREGEPNLLAPVDIFVTTADPLKEPPIVTANTVLSVLSVDYPVEKVSCYVSDDSASMLLFDTLSETAEFARIWVPFCNKYNIEPRAPEFYFSEKLDYLKDKVHPTFVKDRRAMKREYEEFKVKINVLVAKAQKKPEEGWVMQDGNPWPGNNIDDHPGMIQVCLGSAGALDKEGKALPRLVYISREKRPGYQHHRKAGAMNALVRVSAVLSNAPFALNLDCDQYINNSKVLREAMCFLMDPQLGKKFCYVQFPRRFDGIDCNDRYANHNTVFFDINMKCLDGIQGPMYVGTGCVFNRQALYGYEPPSEKRPKMKSCCWPSCCSSCSGDSQSTSDVEESDQELEDFDEEEELSFMSLKNLEKRFGQSPVFIDSALMEDGGLPKGTNTRLLIKEAVHVISCDYEEKTEWGKEIGWLYGSVTEDILTGFNMHCKGWKSVYCMPKKAAFKGSAPINLSDRLHQVLKWASGSTQIFFSGYCPLWYGYSGKLKCLQRLAYTNSIVYPFTSIPLLVYCTVPAVCLLTGKFIIPTLSNLASIWLMALFISIILTCVLELRWSGVSIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVAGVDTNFTVRAKSANDTSFGQLYLFKWTTLFIPPTSLVILNMVGIVAGISDAINNGYDSWGPFFGKLFFSLWVIVHLYPFLKGLMGRQNRTPTIVVLWSILTAIIFSMIWVRLDIFLPKERGPVLKQCGIKC 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00983 884 SUPERFAMILY Nucleotide-diphospho-sugar transferases 332 699 IPR029044 -
Cca02g00983 884 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 1 884 - -
Cca02g00983 884 Pfam Cellulose synthase 178 877 IPR005150 GO:0016020|GO:0016760|GO:0030244
Cca02g00983 884 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 285 469 IPR029044 -
Cca02g00983 884 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 884 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00983 Cca-Chr2 26098863 26103616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00983 76 884 Cell Wall Biosynthesis AT5G17420 70.711 0.0 1238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00983 K10999 - gmx:100777278 1627.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00983 02 26098863 26103616 Cca02g00983 02 26098863 26103616 ECH