Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00969 ATGGAGTCGAAAAACCCTGGGAGGTTTACGTTGGGGAAGCAGTCGTCGTTGGCACCGAAACGCTGCAACGAGGAAGCGGAGCTTCAGAATGAGGGAGACGCCGTTGACCAGAGCGTGAGGTTGATGTATTCGGCGTTTGAAGGCGATGTGGATGGTATTCGTGAGGTGTCGGAGTCTGGGGTTAGTGTCAATTTCAGGGATATTGATTATCGCACTGCTCTTCATGTTGTCGTGTGTGAGGGATTCACTAAGGTCGTTGAGTTTTTGCTCCAGAAAGATGCCGAAGTTGATGCCAAGGATTGA 303 0.505 MESKNPGRFTLGKQSSLAPKRCNEEAELQNEGDAVDQSVRLMYSAFEGDVDGIREVSESGVSVNFRDIDYRTALHVVVCEGFTKVVEFLLQKDAEVDAKD 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00969 100 MobiDBLite consensus disorder prediction 1 30 - -
Cca02g00969 100 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 100 - -
Cca02g00969 100 SUPERFAMILY Ankyrin repeat 39 100 IPR036770 -
Cca02g00969 100 SMART ANK_2a 36 65 IPR002110 GO:0005515
Cca02g00969 100 SMART ANK_2a 69 98 IPR002110 GO:0005515
Cca02g00969 100 ProSiteProfiles Ankyrin repeat profile. 69 100 IPR002110 GO:0005515
Cca02g00969 100 ProSiteProfiles Ankyrin repeat region circular profile. 69 100 - -
Cca02g00969 100 Gene3D - 30 100 IPR036770 -
Cca02g00969 100 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 9 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00969 Cca-Chr2 25901551 25901853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00969 8 100 MAP Kinase Kinase Kinase AT4G18950 52.041 4.86e-26 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00969 - - ccaj:109794064 182.956