Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00968 ATGAGAAGGCGGCATGACCTAATGGAAAAAGGGGCAGCAAAGAATCAGAATTCCCGCCTTTGCTGTTTGGTGTCCCTTTCCGCGTTCTTCTGGTTTTTGCTCCTTTACTTCCATTTTGTGGTTCTTGCAGGAGATAATAGTAATGCCAACACCAAGAGTAATTACAATGACCATGTTGATCACTCGGCTCTATCAACACCTGTTTCTGTTGATTATGAACCTGCCCAAGTCCATGTAACTCATGCCCCTCCTAGAAAGATCGCTTTCCCTAGTGACACCGTAACTGAAACCCCTCGCATGGAGAAGAATTTCCCTTTTATGAAAGCATTGAGAACTGCTGAGAACAAGAGTGATCCCTGTGGGGGGAGGTACATTTATGTGCATGACCTTCCCTCCAGGTTTAATGAGGATATGTTGAAGGAGTGCAAGAGTTTGAGTCTTTGGACTAATATGTGTAAGTTCACCACCAATGCTGGCCTTGGTCCACCCCTTGAGAATGCTGAAGGGGTGTTCTCTAATACTGGCTGGTATGCTACCAATCAGTTTGCGGTTGATGTCATATTCAGCAATCGGATGAAGCAGTATGAGTGCTTGACAAAGGATTCCTCTATTGCTGCTGCGGTTTTTGTACCCTTCTATGCTGGCTTTGACATAGCGCGTTATCTTTGGGGTTTTAATATTTCGGTGAGGGATGCCGCTTCGCTTGATCTGGTTGACTGGCTTGTGAAGAGGCCAGAGTGGAGTATAATGAATGGCAGAGACCATTTTCTTGTGGCGGGGAGGATAACGTGGGATTTCAGGAGGCTATCGGAGGAAGAATCGGATTGGGGCAATAAGCTTCTGTTTTTGCCAGCAGCTAAGAATATGTCCATGCTTGTGGTTGAGTCCAGTCCTTGGAATGCAAATGATTTTGGGATTCCATATCCTACATACTTCCACCCTGCAAAGGATGCTGATGTGTTCATTTGGCAGGATAGAATGAGGAAACTAGAGAGGAAGTGGCTATTCTCCTTTGCTGGTGCTCCCCGTCCTGGCAACCCCAAATCAATCAGGGGTCAGTTAATTGATCAATGCAGAAGCTCTAAGGCTTGTAAGCTGTTGGAATGTGACTTTGGTGAAAGCAAATGTCATTCCCCCAGCAGCATAATGAAGATGTTTCAAAGCTCGCTTTTCTGCTTGCAACCCCAGGGTGATTCGTACACACGAAGATCTGCTTTTGATTCTATGTTGGCTGGTTGTATACCTGTCTTCTTCCATCCAGGCTCAGCTTATACGCAATATACGTGGCATCTTCCCAAGAATTACTCCAAGTATTCTGTCTTCATTCCAGAGGATGATATTCGGAAGAGGAATATCAGTATAGAGGAAAGGCTTAGTCAGATATCTCCTGAGCAAGTGAAGATCATGAGAGAAGAAGTCATTGGTCTCATTCCAAGACTAGTATATGCTGATCCTCGCTCCAAATTAGAAACTCTTAATGATGCATTTGATGTTGCTGTACAAGCAGTAATAGACAAGGTTACAAAGTTGAGGAAGGATATTATTGAAGATCGGACAGATGACAACTTCATTGAGGAGAACAGTTGGAAATATGCATTGTTGCCCGAGGGAGAGCATGAGGTAGGACCTCATGAATGGGATCCTTTCTTCTCGAAACCAAAGGATGGTAGTGGGGATTCCAATGATCCCTCTCCTGAAGCTGCAAAAAATTCTTGGAAGAATGAGCAAAGAAATCATTCATGA 1743 0.4441 MRRRHDLMEKGAAKNQNSRLCCLVSLSAFFWFLLLYFHFVVLAGDNSNANTKSNYNDHVDHSALSTPVSVDYEPAQVHVTHAPPRKIAFPSDTVTETPRMEKNFPFMKALRTAENKSDPCGGRYIYVHDLPSRFNEDMLKECKSLSLWTNMCKFTTNAGLGPPLENAEGVFSNTGWYATNQFAVDVIFSNRMKQYECLTKDSSIAAAVFVPFYAGFDIARYLWGFNISVRDAASLDLVDWLVKRPEWSIMNGRDHFLVAGRITWDFRRLSEEESDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDADVFIWQDRMRKLERKWLFSFAGAPRPGNPKSIRGQLIDQCRSSKACKLLECDFGESKCHSPSSIMKMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKNYSKYSVFIPEDDIRKRNISIEERLSQISPEQVKIMREEVIGLIPRLVYADPRSKLETLNDAFDVAVQAVIDKVTKLRKDIIEDRTDDNFIEENSWKYALLPEGEHEVGPHEWDPFFSKPKDGSGDSNDPSPEAAKNSWKNEQRNHS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00968 580 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 12 534 IPR004263 GO:0006486|GO:0016757
Cca02g00968 580 PANTHER BNAA09G10260D PROTEIN 12 534 - -
Cca02g00968 580 MobiDBLite consensus disorder prediction 540 580 - -
Cca02g00968 580 Pfam Exostosin family 120 457 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00968 Cca-Chr2 25873748 25876330 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00968 K20888 - gmx:100780467 1078.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00968 02 25873748 25876330 Cca02g00968 02 25873748 25876330 ECH
Cca03g02253 03 43375580 43385302 Cca02g00968 02 25873748 25876330 PCT