Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00950 ATGGGAGAAGTGAAGCTACTCGGAGTTTGGCCTAGTCCATACGTTTACAGGATCATATGGGCTTTAGAGCTGAAGGGAGTAAAGTATGAGTATGTAGAAGGAGAATTCCACAAGCCTGATTTCACTGATTTGCTATACAAGTATAATCCAGTTTACAAAAAGGTTCCAGTCCTTGTTCATGATGGAAAGCCAATAGCTGAATCCACTGTTATTCTTGAATACATAGAGGAAACATGGCCATATCCACCCTTGCTTCCACAGGACCCTTATGAGAGGGCTATGGCAAGGTTTTGGGTTAGTTTTGCAGAGGAAAAGAGCATTTCGTTTATGTCATTCTTTGTGACTGTTGGAGAAGAGTTTCAGAACGCCACAAAGGAAGTTAGAGAAGTGCTGAAAGTGTTGGAAGAAACCATTGGGGGCGAAAAGTATTTTGGTGGTGAAGAAATTGGAGTGTTGGACATAAACTTGGGATGGATAGCCTTGTCATTTGGAGTCATTGAAGATGTTGTTGGTGTTGAAGTGTTGGTTGTCAATGATTTCCCTTGCTTGTTTACTTGGGTTCAGAACTTCAGGGAGCACCCCGCTATCAAAACAAACCTTCCAAGTCACCAAGAGTTGTTTGCTTATTACAAGCAAAAGAGAGATACTATTATTCCTTCAGAAGTAGCATCATGA 675 0.4133 MGEVKLLGVWPSPYVYRIIWALELKGVKYEYVEGEFHKPDFTDLLYKYNPVYKKVPVLVHDGKPIAESTVILEYIEETWPYPPLLPQDPYERAMARFWVSFAEEKSISFMSFFVTVGEEFQNATKEVREVLKVLEETIGGEKYFGGEEIGVLDINLGWIALSFGVIEDVVGVEVLVVNDFPCLFTWVQNFREHPAIKTNLPSHQELFAYYKQKRDTIIPSEVAS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00950 224 SFLD Main.3: Omega- and Tau-like 1 218 IPR045073 -
Cca02g00950 224 Pfam Glutathione S-transferase, C-terminal domain 118 194 IPR004046 -
Cca02g00950 224 Gene3D Glutaredoxin 1 87 - -
Cca02g00950 224 SFLD Glutathione Transferase (cytosolic) 1 218 IPR040079 -
Cca02g00950 224 CDD GST_N_Tau 4 79 - -
Cca02g00950 224 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Cca02g00950 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 217 IPR010987 -
Cca02g00950 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
Cca02g00950 224 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Cca02g00950 224 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Cca02g00950 224 PANTHER - 1 220 - -
Cca02g00950 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Cca02g00950 224 Gene3D - 88 220 - -
Cca02g00950 224 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00950 Cca-Chr2 25564596 25566186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00950 3 217 Glutathione S-transferase Gene Family AT2G29420 42.593 3.56e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00950 K00799 - gmx:100500361 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00950 02 25564596 25566186 Cca02g00950 02 25564596 25566186 ECH