Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00946 ATGCAGATGCTCATAGACAAAGATATGTCCAAACAAAAAGACTCCAAGCACCAACTACCAAATGTAGTAGCAAAACTAATGGGGCTTGAAACCCCTCCAAGGGGAGAGCCTAATTTATCTGTAGAGAGAAGCCACAGAAGCGATTATTCTCAACATATGTATGGTCCTATAGGGCTTCCATTCAAGCATTGGCAGCAGGAAGATGGGTTTATGGATATGGAAATGCTTCATGAAATTCATCCAAGCACAGAACAGGTTTCTTACAAAGATATGTATGAAATATGGCAGCAATCTCAGAGAGCAACCTATGTAAGGGGCAAGATACCAGATAGAGGAAAGCGGAATGAAGAAGTTGATGGGAAAAGAATGGCTCTCATTCGTCAGAAATTCATGGAAGCAAAACGTATGTCAACAGATGAGAGACTGCGCCATACCAAACAATTCAAAGAAGCCTTGGAAGTTTTAAGCTCCAATAGTGATCTCTTAGTCAGGTTATTGGATTCTCAAAATGTTTATGAATTTTACTCAACTCCACCAAATGAGACAAAACGTGTCACCCTCATTAAACCTTTGAAGATGATTGACAGTGTCAATGACAAATCTTCCAGTAAGGAGAAAAAAAATAGTAGACTGATTAAGAAACCAGCAAGAGTTGATCAAGCAGCTGTATGGGAAAACAAGAATCCTGGAAACTCTCCAGATAGTCAGAAAGTTGATGATTCTCCAGTTAGAACCACTCGAATAGTGTTACTAAAGCCTAGCCCTGGGAGGACACATGACCAAAAGGCAATGATTTCTCCAACAACTTCATCACCACTGAATCTGAAAAGTGGAAGTTTCCATCAGGGACCTGAATATGAAGATGTACTAGAATCCATTAGAGTGGCAAAGGAGATCACACAGCAAATGCACAAAGGCCTTAGGAGCTATCAAAAGGATAAGACTCCTCATTCTTCAGTGTTTTCCAATGGCTTTTCTGATGATGAGAGTTCATTCAACAAATCTTATCATGAATATGCATCGGCGCATTTCAGCGATTTGGAAGCTATGTCACCATTGCCAAGGCTTTCATGGGATTACACAAATGGCTGTGGCAGTCCTTATTCTACAATGTCCTTGGGTCGAGTGTCTTGCTCTCCTGAGTCATCAGTGTGCAGAGAGGCAAAGAAAAGACTTTCTGAAAGATGGACTATGATGACATCAGATAATAAGGGTCACCAAGAACAAAGGCAATCTACGAGAAGCTCTACCTTGGGTGAGATGCTTTCTCTTACTCATAAAAAGAAATCTGTAACATCTGATGTTGAGAGTATTAATGAAGACCAAGAACCTGGCAAATATGTTTCTTGCAGCCATTCTTTCAATGCAGAAATAAGCATTGAGGGCTCTCCTAAAACTCTTCCCAGGTCAAATTCTGTGCCTGCATCTTCTACTGTCTATGAAGCTGTTGTTGATCACAATACTGGGAAAGCACAGGGCTCCAAGGCGCGGACAAAGTCAAAGAGTATGAGATCATCACTTAAAGGGAAAGTTGCCAGTTTCTTGTTCTCAAGGAGTAAGAAATCAACCAAGAAAAAACCAAGTCCATCTCAATCTACTCCTACTGCCACCGAAACATTAGTTCTTCCAGCAAATTCACCTGAAGTCCTCAGGGATGATGTCTCTCAAAGCATCAATGTGGATCGTTTTGAAGAGTGTTCTCTTGCAGATCTATGTGAATCATCAGGGAAAACTAAAACAGATTTGGTCTCTAACAGACAAGAAGAAGAAGACATGATTACACTAGAGCCTGGATTCACTGTGCCAAGGCCCATGATGTCAGAGATTAATTTAAACGATAACCCGGATCAGCCTAGTCCAATCTCAGTGTTACAACCTCCATTTGAAGATTATAATAGTAATGCATCTCATGAGTCCTTGAACAGCACGAAGAGTGGTCAACTAGGATCACAGGTGTTACTGAAGTCCAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTAGGACCCTATCATGGGATGATTCTTGTGCTGAAGTAGCAAGCCCCTATCCATTAAAACCCTTGATGGTTTCTTCCTTGGACTCCAAGGTAGAGGAACACGAGTGGCTACTCTTGGTCCACAAACTACTATCAGCAGCTGGACTTGATGATCAACACCAATACGACTCGTTTTACACTAGATGGTATTCACTTGAAAGTCCATTGGACCCATCACTGAGGGACACATATGCCAAGGAGCCTATGCCAATGCATGAGGGCAGAAGAAGGAAGATGAGATCAAACCATAAACTTGTGTTTGACTATGTCAATTCTGCACTATTGGAAATTGTTGGTTATGGATCAGAGAAAAGTTGCTTAAAGAGCAGTGGGAGCCACTACAGGGTCCTAGTCCAAGAGGGTGCATCAACCTTATTGGTGGACCACATTGTGGCCCAAATGAAGAAATTAATAGCAAGTGGGATGAAGAGTGAGTGGGAGGGTGGTGGGGACAGCAACAGCCTGGTGGTAGAAAATGTTGTCAGAAAAGAGGTGGTGCAAATAGGGTGGGTTGAGCTTATGGAATTAGAGATTGATGTTTTGGGGAAGGAGATTGAAGGAGAATTGATTCAAGAGCTTGTGGAGAATGTGGTGGTTGATTTTACAGGAAGGGATTGA 2661 0.4171 MQMLIDKDMSKQKDSKHQLPNVVAKLMGLETPPRGEPNLSVERSHRSDYSQHMYGPIGLPFKHWQQEDGFMDMEMLHEIHPSTEQVSYKDMYEIWQQSQRATYVRGKIPDRGKRNEEVDGKRMALIRQKFMEAKRMSTDERLRHTKQFKEALEVLSSNSDLLVRLLDSQNVYEFYSTPPNETKRVTLIKPLKMIDSVNDKSSSKEKKNSRLIKKPARVDQAAVWENKNPGNSPDSQKVDDSPVRTTRIVLLKPSPGRTHDQKAMISPTTSSPLNLKSGSFHQGPEYEDVLESIRVAKEITQQMHKGLRSYQKDKTPHSSVFSNGFSDDESSFNKSYHEYASAHFSDLEAMSPLPRLSWDYTNGCGSPYSTMSLGRVSCSPESSVCREAKKRLSERWTMMTSDNKGHQEQRQSTRSSTLGEMLSLTHKKKSVTSDVESINEDQEPGKYVSCSHSFNAEISIEGSPKTLPRSNSVPASSTVYEAVVDHNTGKAQGSKARTKSKSMRSSLKGKVASFLFSRSKKSTKKKPSPSQSTPTATETLVLPANSPEVLRDDVSQSINVDRFEECSLADLCESSGKTKTDLVSNRQEEEDMITLEPGFTVPRPMMSEINLNDNPDQPSPISVLQPPFEDYNSNASHESLNSTKSGQLGSQVLLKSNLIDKSPPIESIARTLSWDDSCAEVASPYPLKPLMVSSLDSKVEEHEWLLLVHKLLSAAGLDDQHQYDSFYTRWYSLESPLDPSLRDTYAKEPMPMHEGRRRKMRSNHKLVFDYVNSALLEIVGYGSEKSCLKSSGSHYRVLVQEGASTLLVDHIVAQMKKLIASGMKSEWEGGGDSNSLVVENVVRKEVVQIGWVELMELEIDVLGKEIEGELIQELVENVVVDFTGRD 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00946 886 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 885 - -
Cca02g00946 886 MobiDBLite consensus disorder prediction 518 539 - -
Cca02g00946 886 MobiDBLite consensus disorder prediction 254 279 - -
Cca02g00946 886 MobiDBLite consensus disorder prediction 261 278 - -
Cca02g00946 886 Pfam Domain of unknown function (DUF4378) 708 876 IPR025486 -
Cca02g00946 886 PANTHER DUF3741 FAMILY PROTEIN 1 885 - -
Cca02g00946 886 MobiDBLite consensus disorder prediction 488 507 - -
Cca02g00946 886 MobiDBLite consensus disorder prediction 197 242 - -
Cca02g00946 886 MobiDBLite consensus disorder prediction 198 214 - -
Cca02g00946 886 MobiDBLite consensus disorder prediction 225 239 - -
Cca02g00946 886 Pfam Protein of unknown function (DUF3741) 127 170 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00946 Cca-Chr2 25523630 25527321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00946 1 883 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 37.569 3.01e-142 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00946 - - gmx:100787955 1338.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00946 02 25523630 25527321 Cca02g00946 02 25523630 25527321 ECH
Cca03g02276 03 43688271 43692794 Cca02g00946 02 25523630 25527321 PCT