Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00934 ATGGCCGGCAAAGGAGAGGGTCCAGCTATCGGAATCGATCTCGGAACCACCTATTCATGCGTCGGTGTCTGGCAACATGATCGCGTCGAGATCATCGCCAACGACCAAGGTAACAGGACGACGCCGTCTTACGTCGGATTCACCGACACCGAGCGTCTCATTGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCGATCAACACCGTCTTTGATGCCAAGAGATTGATTGGTCGTAGATTCAGTGATGCCTCTGTTCAGAGTGATATTAAGTTGTGGCCTTTTAAGGTTATTGCTGGACCTGGTGAGAAGCCAATGATTCAAGTAAACTACAAGGGTGAAGATAAGCAGTTTGCTGCAGAAGAAATCTCTTCTATGGTACTTATGAAAATGCGTGAGATTGCTGAAGCTTATCTTGGCTCCACAATCAAGAATGCTGTCGTTACTGTCCCTGCTTACTTTAATGATTCTCAGCGTCAAGCTACCAAGGATGCTGGTGTTATTGCTGGTCTTAATGTCATGCGAATTATCAATGAGCCAACTGCCGCTGCCATTGCTTATGGTCTTGACAAGAAGGCTACCAGTGTTGGCGAGAAGAATGTCTTGATTTTTGATCTTGGTGGTGGTACATTTGATGTTTCATTACTTACCATTGAAGAGGGTATCTTTGAGGTGAAGGCCACAGCTGGTGACACACATCTTGGAGGTGAGGATTTTGATAACAGGATGGTGAACCATTTTGTTCAGGAATTTAAGAGAAAGAACAAGAAGGATATCAGTGGCAATCCCAGAGCACTTAGGAGGTTGAGGACTGCTTGTGAGAGGGCTAAGAGAACTCTATCTTCCACTGCCCAAACCACCATTGAAATTGATTCTCTGTACGAGGGAATTGATTTCTACTCTACCATCACCCGTGCAAGATTTGAGGAGCTCAATATGGATCTCTTCCGCAAGTGCATGGAACCAGTTGAGAAGTGTTTGAGAGATGCTAAGATGGACAAGAGGTCTGTCCATGATGTTGTACTTGTTGGTGGATCCACTAGAATTCCTAAGGTTCAACAACTTCTGCAAGATTTCTTTAATGGGAAGGAGCTCTGCAAGAGCATCAATCCTGATGAGGCTGTGGCATATGGTGCTGCAGTTCAAGCTGCCATCTTGAGTGGTGAGGGTAACGAGAAGGTTCAGGATCTTCTCTTGCTTGATGTCACCCCACTCTCTCTTGGGTTGGAAACTGCTGGTGGTGTGATGACAGTCCTGATCCCAAGGAACACTACAATCCCAACAAAGAAAGAACAGGTTTTCTCAACTTATTCTGACAACCAGCCTGGTGTGTTGATCCAGGTTTATGAAGGTGAGAGAACAAGGACTAGAGACAACAATTTGCTGGGCAAATTTGAACTCTCAGGCATTCCTCCTGCACCCAGGGGTGTTCCTCAGATTACAGTTTGCTTTGACATTGATGCCAATGGTATCTTGAATGTCTCTGCTGAAGACAAAACTACCGGCCAAAAGAATAAGATCACCATTACCAACGATAAGGGTAGATTGTCAAAGGAAGAGATTGAAAAGATGGTTCAAGAGGCTGAGAAGTACAAATCTGAAGATGAAGAGCACAAAAAGAAGGTAGAGGCAAAGAATGCATTGGAGAACTATGCATACAACATGAGGAACACAATAAAGGATGAGAAGATTGGAGGGAAACTTGATCCAGCTGACAAGAAAAAGATTGAGGATGCCATTGAGCAGGCCATCCAGTGGCTTGACAGCAACCAGCTTGGAGAGGCAGATGAGTTTGAGGACAAAATGAAGGAATTGGAAAGCATCTGCAACCCTATCATTGCCAAGATGTACCAAGGTGGTGCTGGTCCAGACACGGGAGCTGGTGGGATGGACGATGATGCTCCAGCTGGTGGAAGTGGTGCTGGTCCAAAGATTGAGGAAGTAGACTAA 1950 0.4569 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDASVQSDIKLWPFKVIAGPGEKPMIQVNYKGEDKQFAAEEISSMVLMKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKRSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIGGKLDPADKKKIEDAIEQAIQWLDSNQLGEADEFEDKMKELESICNPIIAKMYQGGAGPDTGAGGMDDDAPAGGSGAGPKIEEVD 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00934 649 MobiDBLite consensus disorder prediction 617 649 - -
Cca02g00934 649 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Cca02g00934 649 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Cca02g00934 649 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Cca02g00934 649 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Cca02g00934 649 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Cca02g00934 649 Gene3D - 71 126 - -
Cca02g00934 649 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Cca02g00934 649 Gene3D - 10 384 - -
Cca02g00934 649 Coils Coil 521 541 - -
Cca02g00934 649 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Cca02g00934 649 Gene3D - 192 366 - -
Cca02g00934 649 PRINTS 70kDa heat shock protein signature 8 21 - -
Cca02g00934 649 PRINTS 70kDa heat shock protein signature 36 48 - -
Cca02g00934 649 PRINTS 70kDa heat shock protein signature 58 66 - -
Cca02g00934 649 PRINTS 70kDa heat shock protein signature 146 166 - -
Cca02g00934 649 PRINTS 70kDa heat shock protein signature 209 219 - -
Cca02g00934 649 PRINTS 70kDa heat shock protein signature 337 353 - -
Cca02g00934 649 PRINTS 70kDa heat shock protein signature 369 389 - -
Cca02g00934 649 PRINTS 70kDa heat shock protein signature 396 415 - -
Cca02g00934 649 PRINTS 70kDa heat shock protein signature 477 493 - -
Cca02g00934 649 Gene3D - 545 619 IPR029048 -
Cca02g00934 649 Gene3D Actin; Chain A, domain 4 235 318 - -
Cca02g00934 649 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 628 - -
Cca02g00934 649 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Cca02g00934 649 PANTHER HEAT SHOCK PROTEIN 70KDA 1 628 IPR013126 GO:0005524|GO:0140662
Cca02g00934 649 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 624 IPR029048 -
Cca02g00934 649 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00934 Cca-Chr2 25287548 25291288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00934 1 649 Calmodulin-binding Proteins AT3G12580 92.627 0.0 1228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00934 K03283 - gmx:100804917 1216.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00934 02 25287548 25291288 Cca03g02284 03 43791487 43795024 ECH
Cca02g00934 02 25287548 25291288 Cca02g00934 02 25287548 25291288 ECH
Cca02g00934 02 25287548 25291288 Cca04g00655 04 6460817 6464164 ECH
Cca03g02284 03 43791487 43795024 Cca02g00934 02 25287548 25291288 PCT