Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00933 ATGGCAGACTCCACTCCGATTGCAACTCCTTCTAAAAACGACGCATCATGCTCTTTCCAACGAACGGTCGTATTATACGATTGGTGGTTGATTAAAGCCAAAACCGACTTCCAAGGGAAGCGTTTAGCCGTCGCAGGCGTTTCGTCGAGAAAGAATGAGGCAGTGCGCGTGTTTGTTTCTGCTGCTGTTATCAAGAGATATGACGTGTTTTCTCTCGAGACTGCCGATGGGAAGTGCGTCATGATCAAAGGTTTCATCAACGAGCAGCGCACTCTCGAAAATGGTTTCGCTCCAGAGGTTTTCAACCGTTTTTTATTTGGCTTTCCTTCAAACTGGGAAAGCTATGCTCTAGATTGCTTCATAGAAAAGTCTACCATTCTCAATGATTTAAGTCCAGAAATTTTATCGGATGGTGTGGAAAATTCCATTCCTATTTCTTTGGTATCACCAGAGGAGGCCCCGGGAGATCACGATAAACCATTACCTGAAAATGACAGCAATGTGTCAAAGGAGATGGGCGGGTTTAATGTTGCTTGTAGTAGTGGTGGGAAAAGACGTAGTGCTAGGTTGCATGATATTAAAGTATGCCAACAGAAGAAGCAGCACGCTTCTGGAGGTCTTCCATATCATCCAGATAATGAGGAGAACTCTACTTCAGTGACTGTAGAGGGTCTGAAAAGTCTGGCAACCCCCATTCAGTCACAATCGTGGAGTGAATATTCAAACAATGCCTGTGTGCAAAGTTCTATTCCTACTTTGGTAACTTCAAAGGAGGTCCCGGGACATCTCAAGAAGCCATTCCCTGAAAAAGAATGCAATGCGTCAAAGGAGATTAATAGGGTTAATGTTGCTTGCAGTAGTGGTGGTAAAACGTGTAGTGCCAGGTTGCATGATATTAAAGTGTGCCGGCAGAAGAAGCAGCCTGCTTCTGGAGGTCTTCTGAATCATCCAGATGATGAAGAGAACTCTACTTCAGTGACCTTAGAGAGTCTGAAAAGTACAGCAGCACCCATTCAGTCACAATCGTGGAGTGAATATTCAACCGATGCTTGTGTTGAAAAATCCATTCCTACTTTGGTATCTCCAGAGGAGGCCCCGGGACATCACAGGAAGCCATTTCCTGAAAATGAATGCATTTTGTCAAAGGAGATTGGTGGGGCTAATGTTGCTTGCAGTAGTGGTGGTAAAAGACGTAGTGCCAGGTTGCACGATATTAAAGTTTTCCGGCAGAAGAAGCAGCCTGCTTCTGGAGTTCCTCCTAAGCATCCAGATAATGAAAACTCTACTCCAGTGGTCTTGGAGAATTGTGATGTAGCGGGACCGAGTCCAGCAACTCCCATTCAGTCACAATCCTGGAGACAACTAAGCACATCATCTGAGCAGCTAGTTAAAAAATCTGCATCCAGAATTTCTAAAACCTTGTTTCCAATGTCTGAAAGCTGTTGTAAGAAAAAGAGAGTGATCGTTGAAACAAAATCGGTTAGGCCTATGAGAAAACAGACTAAGTCTGCATCTGCTGTGAAAAATTCGCGAGAAAAAGATCTAAGCCACGTGATCAGGGGAAGCCGACAGAAAATATCCACAGTTTCTCCAGAGTCGTTTAGTTTTAGTAAATCCAGATCTGGTAGGTTGCTTCTACCTCCCTTGGAGTTTTGGCGCAATCAAATACCAATTTATAATGCGGCCCATGAAATTACAGAAATTCAGGACGTTGCATCTACGATATCACCTTGTAGAGGTTCTTCACCATCATTGAGCAGGTTTAACAATCAGAAACGTGCAGCGTGA 1788 0.4402 MADSTPIATPSKNDASCSFQRTVVLYDWWLIKAKTDFQGKRLAVAGVSSRKNEAVRVFVSAAVIKRYDVFSLETADGKCVMIKGFINEQRTLENGFAPEVFNRFLFGFPSNWESYALDCFIEKSTILNDLSPEILSDGVENSIPISLVSPEEAPGDHDKPLPENDSNVSKEMGGFNVACSSGGKRRSARLHDIKVCQQKKQHASGGLPYHPDNEENSTSVTVEGLKSLATPIQSQSWSEYSNNACVQSSIPTLVTSKEVPGHLKKPFPEKECNASKEINRVNVACSSGGKTCSARLHDIKVCRQKKQPASGGLLNHPDDEENSTSVTLESLKSTAAPIQSQSWSEYSTDACVEKSIPTLVSPEEAPGHHRKPFPENECILSKEIGGANVACSSGGKRRSARLHDIKVFRQKKQPASGVPPKHPDNENSTPVVLENCDVAGPSPATPIQSQSWRQLSTSSEQLVKKSASRISKTLFPMSESCCKKKRVIVETKSVRPMRKQTKSASAVKNSREKDLSHVIRGSRQKISTVSPESFSFSKSRSGRLLLPPLEFWRNQIPIYNAAHEITEIQDVASTISPCRGSSPSLSRFNNQKRAA 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00933 595 Pfam SANTA (SANT Associated) 23 115 IPR015216 -
Cca02g00933 595 MobiDBLite consensus disorder prediction 149 168 - -
Cca02g00933 595 PANTHER MIS18-BINDING PROTEIN 1 9 587 - -
Cca02g00933 595 MobiDBLite consensus disorder prediction 496 517 - -
Cca02g00933 595 PANTHER MIS18-BINDING PROTEIN 1 9 587 IPR039110 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Cca02g00933 SANTA 3.7e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00933 - - ccaj:109806284 1177.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00933 02 25265118 25272248 Cca02g00933 02 25265118 25272248 ECH