Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00919 ATGGAGAACCCCCAGACACAAAACTGGTTCCAAAGAGTGAAACCGTTCGCAGCTGTGGTATCAATCCAGCTTGGATATGCTATTATGGATGTTCTATCCAAGACTGCAATGAACAAAGGAATGAGCAATTACGTGTTTGTCGTTTATCGCCATGCTGTTGCATTCATTGTCATAGCTCCTTTGGCATGGTTTTTTGACAAGAAAGTGAGGCCAAAGATGACATTGTCAATTTTCATAAAGATTGTGGTGCTCAGCTTGCTAGAGCCAGTTATTGATCAGAATTTGTATTTTTTGGGGATGAAGTACACAACAGCAACCTTTGCTGTTACCATGATCAATATCCTTCCAGCCATCACCTTTATCTTCGCATGCATTTTTAGGCTTGAAAAGATAAAAATAAGAAGTATACACAGCCAAGCAAAGGTGGTAGGAACTCTAACAACTGTTTCGGGTGCTATGGTGATGACACTGTTGAAAGGTCCAGTGCTTTTCGGGTCACACAGAAGCAATGATGACAGCCAGAATGGGACAAGTACTCAACATACAATAACGGGATTCATAATGATCACAATTGGATGCTTTTCTTGGGCGTCTTTTATGATCCTACAGGCTATTACGCTTAAAAGCTACCCTGCAGAACTCTCTCTTTCTGCGTGGATATGCCTAATGGGCACAATTGAAGGTGCTGTAGTGGCTATGATTATGGAAAGGGGCAACCCTTCAGTTTGGTCTATAAAATTCGATGTCAGACTGCTCTGTGCTATCTACACCGGCATAGTGTGCTCGGGAGTGGCTTATTACTTGCAAGGAGTAGTAATGCAAACTAGAGGCCCAGTCTTTGTAACAGCATTTAGTCCCCTCGGCATGGTAATCGTGGCCATCATGGGCTTCTACTTTCTTTCCGAGCAAGTCTTCCTCGGAAGATTGATCGGTGCTATAATCATTTGTTTGGGCCTGTACGTTGTGGTGTGGGGTAAAAGCAAAGATTACAGCCCACCAAGCCCAAATACTCAAGAGCCCATATTACCAGCTAAGCAAATAATGGACAAGGACAATGACTATGCTAACGAAAATTGCACCGTCAACAATTTTGGAAATGGAATGGCTACTCAAAATGAAGAAGTGTGA 1128 0.4273 MENPQTQNWFQRVKPFAAVVSIQLGYAIMDVLSKTAMNKGMSNYVFVVYRHAVAFIVIAPLAWFFDKKVRPKMTLSIFIKIVVLSLLEPVIDQNLYFLGMKYTTATFAVTMINILPAITFIFACIFRLEKIKIRSIHSQAKVVGTLTTVSGAMVMTLLKGPVLFGSHRSNDDSQNGTSTQHTITGFIMITIGCFSWASFMILQAITLKSYPAELSLSAWICLMGTIEGAVVAMIMERGNPSVWSIKFDVRLLCAIYTGIVCSGVAYYLQGVVMQTRGPVFVTAFSPLGMVIVAIMGFYFLSEQVFLGRLIGAIIICLGLYVVVWGKSKDYSPPSPNTQEPILPAKQIMDKDNDYANENCTVNNFGNGMATQNEEV 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00919 375 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020|GO:0016021
Cca02g00919 375 Pfam EamA-like transporter family 24 136 IPR000620 GO:0016020|GO:0016021
Cca02g00919 375 PANTHER WAT1-RELATED PROTEIN 10 349 - -
Cca02g00919 375 PANTHER WAT1-RELATED PROTEIN 10 349 IPR030184 GO:0016021|GO:0022857
Cca02g00919 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 137 - -
Cca02g00919 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00919 Cca-Chr2 25004640 25010704 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00919 1 375 Nodulin-like Gene Family AT2G37460 58.421 3.82e-158 447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02299 03 43937465 43941164 Cca02g00919 02 25004640 25010704 PCT