Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00916 ATGTTGTTGTGTTCATCAAATGTTGTCTCCGTTACCGTGGGTTTGTTTCCATTTGACCTCCTTGCAGGTTCTTCTCCTCATGAAAGGTCGTCTCTCTTTCCATTTGAAATCCTTGCAGgcCAGAATGGGACAAGTACTCAACATACAATAACGGGATTCATAATGATCACAATTGGATGCTTTTCTTGGGCGTCTTTTATGATCCTACAGGCTATTACGCTTAAAAGCTACCCTGCTGAACTCTCTCTTTCTGCGTGGATATGCCTAATGGGCACAATTGAAGGTGCTGTAGTGGCTATGATTATGGAAAGGGGCAACCCTTCAGTTTGGTCTATAAAATTCGATGTCAGACTGCTCTGTGCTATCTACACCTCCATCAAACCTAGCACTGTGCAAGGGTTTCATATCTACGAAGAGTCTAAAATTCTTACCTACGAGCCTGATGTTTGGCGTACTTTGGTCAAAGAAGCATGTGGTTCATGTGTAACAGTCTTATGTGCGTACTGTGTTTGA 513 0.425 MLLCSSNVVSVTVGLFPFDLLAGSSPHERSSLFPFEILAGQNGTSTQHTITGFIMITIGCFSWASFMILQAITLKSYPAELSLSAWICLMGTIEGAVVAMIMERGNPSVWSIKFDVRLLCAIYTSIKPSTVQGFHIYEESKILTYEPDVWRTLVKEACGSCVTVLCAYCV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00916 170 PANTHER WAT1-RELATED PROTEIN 40 131 - -
Cca02g00916 170 PANTHER WAT1-RELATED PROTEIN 40 131 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00916 Cca-Chr2 24955476 24957485 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00916 39 136 Nodulin-like Gene Family AT2G37450 59.000 1.19e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00916 - - gmx:100811147 159.844