Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00911 ATGATCAGGAAGGCGGTCGCGGCTATGGCGACGCAGGTGGGTTTGAGGAGAGGGGAGAGAAGaggggttaggggttggatgaagttggttaaggggttttggggtttgggTAACGGTGACGGTGAGGCTCTTATGGGAGAGAATGGTGGTGGAGAGAGGGAAGAGAAAGATGTTGGAAATGAAGAAGGAGGGAACTTAGAAGCACGTCCTAGTGGCgagcgagaTTCACTCTTGAGCTCAGGATCTGCGTCCACGTCCAAGGCGGTGAAGCTCGTCGACAACAAGAAGACCGCTGTGCTCTTGTCACCGGCGATTTTCCGCCACCTCGGCAACATCGCCGCGTTCCTGGCGAACGTGCGGAGGATCTCGCTAGGCGTGGTGGTTTTCGTGGACGACGAGGGTTGggcggaggcggcgactgcggcggtggcATCGTTTCGGCGCGGCGCTGTGAGCAGCCTGGAGTACTACTCGATGATGTTGGAGTCGCTGGACGCTTCGACGGAAGTGGAGAGCACGTGGCGAAAGATGCCACTGTGCGAATTTGGATccaaattcgaatag 564 0.4734 MIRKAVAAMATQVGLRRGERRGVRGWMKLVKGFWGLGNGDGEALMGENGGGEREEKDVGNEEGGNLEARPSGERDSLLSSGSASTSKAVKLVDNKKTAVLLSPAIFRHLGNIAAFLANVRRISLGVVVFVDDEGWAEAATAAVASFRRGAVSSLEYYSMMLESLDASTEVESTWRKMPLCEFGSKFE 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00911 187 MobiDBLite consensus disorder prediction 44 81 - -
Cca02g00911 187 PANTHER SCARECROW-LIKE PROTEIN 15 91 175 - -
Cca02g00911 187 Pfam GRAS domain family 89 176 IPR005202 -
Cca02g00911 187 MobiDBLite consensus disorder prediction 47 69 - -
Cca02g00911 187 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 91 175 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00911 Cca-Chr2 24848418 24849772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00911 77 167 GRAS Transcription Factor Family AT4G36710 51.648 7.49e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Cca02g00911 GRAS 4.6e-07 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00911 - - gmx:100807470 127.102