Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00909 ATGTCACCAAAATCTGAATCTAAAAGAAGATCCCCTGGTGTTATTGCCAGGTTGATGGGTCTTGATGGACTGCCGTTCCAGCAGCCAACTAATAAGCAGCATAAGGGTTTGTCAGAAAACCACCAACAGAAGGCAGCGCAGTTAGAGAAAACTCGCAGCAGAGGAATGTCATATGATGGTCCATCGTCTAGAAGAAGCTCAAAGGATCAGCAAGAATTTAAGGATGTGTTTGAGATCTCAGAGATTTCAAAGGTAGAGAGTAATAGGTATCCATCGGAGGGGTGTGCAGACTTGAAGTCTGCTGATGCTGAAATTTCGTTCATTGAGCAGAAGTTCAGGGATGCCAAACGCCTTGCAACTCACCAAGATGTGCAGTCTTCAAAGGATTTCCGCGACACACTTGAGGTTTTGGACTCTAACAAGGATCTTCTGCTTAAGTACTTTAAGCGGCCAGATTCTTTGTTTAAAAAGCATCTAAATGATCTCGAAGCTGCTCCTGTCCAATCACATTATGGTGATGTAGGAGCTATGGATATTGAGAAGAATGAACATGACATCAATTGGAGGTCAGATAGGGAGAAAACACGGTTGAACTACAATAGATCTCACGGGAAGCATCATGATGGCTATCCCTGTCAGTTTGACAAAAGGCATGCGATGCATAGTTCACCAAAATCATCAAAGCTTCAATTTAAGGGTAGACCTGAGCAAGATGCAGTCCCCACAAAGATTGTCGTCCTGAAACCTAATCTTGGAAAAGTGCAGAATGGTACCAGAATCGTATCATCACCTTGTTCTTCACATAGTTTTCTGCAAGGGCAAGAAAATGACACTGGTTTTTCAGGTGTCAAATTTAGAGACACTGAACTGCGTCATGTGACAAATTTGCCTGAAAGTGCCAGATCTTGGAGGCAAGATTCTTTTGAATCTAGAGAAATTGCAAAGGAAATCACTAGGCAAATGAAAAATAGTCTTAACAATGGCTGCATGATGATATCTACTTCTAGATTTAGAGGATATGCTGGGGATGATAGTTTTTGTAGTGTTTCTGGGAATGAATCTCCCGAGGAGTCTGAGGAAACAACATCAACATTGGGAAATTCATTAGACTTGAACAACCGTAGCAGGCGATCTTCCCGTTCTAGTGAATCTTCTGTCAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGACTCACAAGTCTCAAGAGATGCAAGGCATCAGCAGGAGCAGCACACTGGCTGATATGCTTGCCATTCCTGACAAGGAATTGAAGGATGCAAATGTCGACAGCATGGCTAGTGGGGAGGGTTTCCATGGTAAATTTACTCCCAATGGTGAACCTGCCAAGTGGGTTGAACCATTGGGTATCAGCAGCAGGGATGGTTGGAAAGATGGATGCATTGGTAGTTTGTCAAGGTCAAAATCCCTTCCGTCTTCATCTACTGCATTTGGAAGTCCTAGAACATTCTTGCGTACTGAAGCACTTCGTGATGATCGATTTATGGTTCCAAAGGAAGCCCATAAACGTGAGAGGAGAAGAGCTGCAAAGAGTCTTGATCTTAGACATGGTGTGAATAACAGAAGCACAAGGGCTGGTCACAAAAAGTCTTGTTCCTTGCATTCATCAAAGCTCGAAGCTGATGATTTTTCTCCAGACCTGCACACAATTCAGAATAAAATGAAGATCAATCTTGAAGATTCACCCAAGCTTGAGGTTCTGGCTAATGAATCTCTAGCAGAGACTGTAAGAGATACAAGTGCAGTTACTGATGATGATGTGCATGTGACAAATGGAAGTGAAGTTGTGTCTTCCAAATCTTCTAATAAGATGCTTCCTGGATTATCTTCTCATGTTTTGATAAAAGGCGGCAGTAGTGCAGTTGACAAAGACAATTCAATTCAGCAGGATCTATCTACTGGGTCTTCTGGTGGAGGTTCGGTCCTCTATGAACCACCTGCCCCTGGACTTGAATCTTGCTGTAAAGATGCTGATCAACCCAGTCCCGTCTCAGTCCTAGAACCTTCTTTTACAGATGATCTGTCATCTTGTTCTGAATGTTTTGGAAGTCTCAGTGCTGATCTACAAGGGCTGCGAATGCAACTCCAGTTGCTGAAGTCAGGATCCGAAGAATATGTGGAGGGACCCATGATACTAAGTGATGAAGATGGCGTGGAAGTATCTACTGGAATGTTCGAAGACAGTGGATTACGTAGAACTGAAGATAACTGGGAGACTTCCTACATTATCGACGTGTTGTCTGAATCCGGCATTGATGGAGTTCATCCCGACACAATTTTGGACCTTTGGCATTCCCTAGAATGCCCTGTGAGTCTTTCGGTGTTTGATGATCTTGAAAAGAGGTATAATGATTTGACTACTTGCTCAAAGTCTCAAAGGAGATTGCTTTTTGACCGTATAAATTTGGGAATTGTCAAGATCAATCAACAATCCACTAATGCACTACCATGGGTGGGTCCAGCCACCTCACATATGATTGGTTCTAGTTTGATCAAGAACGGTTTCCGAGATGGTCTTTGCAGGATGCTAGAGAGCCAAGAAAAAGTGAAGGATGACGCTCTAGGGAAGGTGCTGGTTATGGAATCGGAGTGGTTGGAGTTGAGAGATGACATTGATATAATAGGCAGGGAAGTTGAGAGATTGATATTAAATGATTTAGTGGCAGAAATAGTCGGTACTAAGAAATTTTGTGCCTGA 2727 0.4287 MSPKSESKRRSPGVIARLMGLDGLPFQQPTNKQHKGLSENHQQKAAQLEKTRSRGMSYDGPSSRRSSKDQQEFKDVFEISEISKVESNRYPSEGCADLKSADAEISFIEQKFRDAKRLATHQDVQSSKDFRDTLEVLDSNKDLLLKYFKRPDSLFKKHLNDLEAAPVQSHYGDVGAMDIEKNEHDINWRSDREKTRLNYNRSHGKHHDGYPCQFDKRHAMHSSPKSSKLQFKGRPEQDAVPTKIVVLKPNLGKVQNGTRIVSSPCSSHSFLQGQENDTGFSGVKFRDTELRHVTNLPESARSWRQDSFESREIAKEITRQMKNSLNNGCMMISTSRFRGYAGDDSFCSVSGNESPEESEETTSTLGNSLDLNNRSRRSSRSSESSVSREAKKRLSERWKMTHKSQEMQGISRSSTLADMLAIPDKELKDANVDSMASGEGFHGKFTPNGEPAKWVEPLGISSRDGWKDGCIGSLSRSKSLPSSSTAFGSPRTFLRTEALRDDRFMVPKEAHKRERRRAAKSLDLRHGVNNRSTRAGHKKSCSLHSSKLEADDFSPDLHTIQNKMKINLEDSPKLEVLANESLAETVRDTSAVTDDDVHVTNGSEVVSSKSSNKMLPGLSSHVLIKGGSSAVDKDNSIQQDLSTGSSGGGSVLYEPPAPGLESCCKDADQPSPVSVLEPSFTDDLSSCSECFGSLSADLQGLRMQLQLLKSGSEEYVEGPMILSDEDGVEVSTGMFEDSGLRRTEDNWETSYIIDVLSESGIDGVHPDTILDLWHSLECPVSLSVFDDLEKRYNDLTTCSKSQRRLLFDRINLGIVKINQQSTNALPWVGPATSHMIGSSLIKNGFRDGLCRMLESQEKVKDDALGKVLVMESEWLELRDDIDIIGREVERLILNDLVAEIVGTKKFCA 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00909 908 Pfam Protein of unknown function (DUF3741) 109 153 IPR022212 -
Cca02g00909 908 MobiDBLite consensus disorder prediction 347 380 - -
Cca02g00909 908 MobiDBLite consensus disorder prediction 347 412 - -
Cca02g00909 908 PANTHER AFADIN 3 901 - -
Cca02g00909 908 Coils Coil 31 51 - -
Cca02g00909 908 MobiDBLite consensus disorder prediction 20 73 - -
Cca02g00909 908 Coils Coil 98 118 - -
Cca02g00909 908 MobiDBLite consensus disorder prediction 26 44 - -
Cca02g00909 908 Pfam Domain of unknown function (DUF4378) 749 899 IPR025486 -
Cca02g00909 908 PANTHER AFADIN 3 901 - -
Cca02g00909 908 Pfam DUF761-associated sequence motif 6 26 IPR032795 -
Cca02g00909 908 MobiDBLite consensus disorder prediction 381 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00909 Cca-Chr2 24795407 24800467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00909 1 901 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 35.831 9.70e-135 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00909 - - ccaj:109788117 1737.62