Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00905 ATGAGAATCTTTTCCTCCAAAACGCCGTCGTTTGCCTTTTACCGCAACACTTCGCCACCGAGTTCAACCGCAGCGCCTTCAACCAGCAGGAGCAACGACGTGGACATCGACATGGACGAAGTGGAAGCCCTGATACTGAAATGGAACCCCGAAACGTCGGTCTACAGCAGCGTCACCTCTCTTTTCTTCAACGACAAAACGGAGGCCATGCAATACATCCACAGCGTGAACCAGCTCCAAAAACTCATGCACTCCTTGCACAAACAAAACCCTTCCTCACCCAAACTCATCCTCGCGCAAAGCCTAATGCAAATCGCCATGAAGAGGCTCCAGAAAGAGTTCTACCAGATCCTCTCCATGAACCGGGCCCACCTCGACCCCGACTCCGTCTCCACCAGATCCTCCACCTCCAGAACCTCTTTCTGTTCCGACAGCTACGACGACGCCTCAGTAGAAGACGATGTGCGCCACTCAGGGGATACCATCTCCGAAGTCGAACGCGTCTCTTCCGAGGCCATGGCGGATCTCAAATCTATCGCTGATTGCATGGTTTCAAACGGTTACACCAGGGAATGCGTCCGCGTTTACACCACCATGAGAAAATCCATCGTAGACGAAGGCATTTATCGCCTCAGCGTCGAGGAATGGACCTCCTCCAAGGTCAACAAGCTGGCCTGGGATGTGCTCGACTTCAAAATCAAGAAGAGGATCCTCTGCGATCACGTCTTCGCTGGATCTCAATCCATCAGAGAAGCCTGCTTCGCCGAGATTTCTAGAAACGGAGCCTCTCTTTTGTTCAGATTCCCCGAACTCGTCGCCAAAACGAAGAAATCGCTGCCGGAGAAGATCTTCCGGTTGATAGAAATGTACGCCGCAATCGCCGCGCTGTTGCCGGAGATTGAATCGATATTCTCGCTAGATTCAACAGCAGCTGTTAAATCTCAAGCCTACGCTCTGTTTCTCCAACTCTCCGAGTCCGTACGAACAAGTCTCATGGAATTCGAAACCACGATTCAGAAAGACTCTTCCAAATCGGCGGCGAACATCGCTGCCGTCCATTCCCTGACAGTGCAAGTAATGAATCACTTGTCTACTCTCGCGGACTACAGCAACGTGCTATCCGAAATTTTCTTCGACGTGTCTCAACCGCCGAGGTCGCCGTTGCCGGAATCTTACTTGTACAGTCCAGAACCAAACTACGCGACGGAGACGGAGTTCTCGGCGCGTATGGCGCGGCTGATTCTGGTTCTTCTCTGCAAGATCGACGCTAAATCGAGGCATTGCAAAGAGGTTTCGGTGTCTTACCTGTTTCTGGCAATGAATCTCCGGCACGTGGTGGCGAAGGTCCGTACCTCGAACTTGCTTTACGTGCTCGGCGACGATTGGGTGTTGAATCACGATGCGAAGGTGAAACGGTTGATTGCGAAGTACGAGAGAGTGGCGTGGGGGAAGGTGGTTTCGTCTTTGCCGTCAAATCCAGCGGCGGAAATGTCGGCGGCTGAGGCGAGGGTTGTGTTTGGAAACTTCAATTTTGAATTCGAGAAGGCTTATCGGAGAGAGAACGCGTTTAGTGTGTCGGAACGAGAGTTTGGAGAAGAAGTCAAGGTGTCTCTTGTGAGAAAAGTAATTCCCGTTTACCGCGAGGTGTTTGAAACGCACCGTATTGCAGTGGGATCGGTGAGAGATATGAGGGATTATGTCACTTTTACCCCTGAAGATGTTGAGAATTACATGTTGAACCTCTTCTCCGTGGGAAGAGCAAGCTCCGGTGCTGGAGGCAACGGTTCATGTTTTGTAAGGAAAAAATAA 1809 0.513 MRIFSSKTPSFAFYRNTSPPSSTAAPSTSRSNDVDIDMDEVEALILKWNPETSVYSSVTSLFFNDKTEAMQYIHSVNQLQKLMHSLHKQNPSSPKLILAQSLMQIAMKRLQKEFYQILSMNRAHLDPDSVSTRSSTSRTSFCSDSYDDASVEDDVRHSGDTISEVERVSSEAMADLKSIADCMVSNGYTRECVRVYTTMRKSIVDEGIYRLSVEEWTSSKVNKLAWDVLDFKIKKRILCDHVFAGSQSIREACFAEISRNGASLLFRFPELVAKTKKSLPEKIFRLIEMYAAIAALLPEIESIFSLDSTAAVKSQAYALFLQLSESVRTSLMEFETTIQKDSSKSAANIAAVHSLTVQVMNHLSTLADYSNVLSEIFFDVSQPPRSPLPESYLYSPEPNYATETEFSARMARLILVLLCKIDAKSRHCKEVSVSYLFLAMNLRHVVAKVRTSNLLYVLGDDWVLNHDAKVKRLIAKYERVAWGKVVSSLPSNPAAEMSAAEARVVFGNFNFEFEKAYRRENAFSVSEREFGEEVKVSLVRKVIPVYREVFETHRIAVGSVRDMRDYVTFTPEDVENYMLNLFSVGRASSGAGGNGSCFVRKK 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00905 602 SUPERFAMILY Cullin repeat-like 39 582 IPR016159 -
Cca02g00905 602 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 589 - -
Cca02g00905 602 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 589 IPR004140 GO:0000145|GO:0006887
Cca02g00905 602 Gene3D Exocyst complex component Exo70 58 589 - -
Cca02g00905 602 Pfam Exo70 exocyst complex subunit 234 579 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00905 Cca-Chr2 24738065 24740397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00905 44 582 EXO70 exocyst subunit family AT3G09520 49.378 5.41e-180 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00905 K07195 - gmx:106795635 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00905 02 24738065 24740397 Cca03g02313 03 44101950 44104624 PCT