Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00885 ATGGCAACTCTTGGCGTTCGTCCTCCTCCACTAACTTCCACCGCCGAACCACCCCCTCTTTTTGATGGCACCACCAGGTTGTACATCGATTATGGTTGCCCCTTTGCACAACGTGTATGGATCGCTAGGAACTACAAGGGGCTACAAGACAAGATCAATTTGGTCCCTATAGACCTTCGAGATAGGCCTGTGTGGTATAAGGAGAAAGTCTACCCCGGAAACAAGGTGCCTTCCTTGGAGCACAATGGCAAGGTTTTGGGAGAAAGTCTTGATTTGATCAAATATGTAGATGTGAACTTTGAAGGGACACCTTTGTTTCCCAGTGATCCTGCCAAGAAAGAGTTTGGTGAGCAATTGATATCCCATGTTGATACATTTACTAAAGACCTGTTCTCTTCATTGAAAGGGGATCCTGTACAGCAAGCCAGCCCTGCTTTTGAATACTTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCATTCTTGCTTGGGCAATTCAGTTTGGTGGATATTGCCTATATTCCATTTGTTGAAAGATTCCAAATTGTCTTTGCTGAGGTGTTCAAGCATGACATCACAGAAGGAAGGCCTAAACTTGCAAAATGGATTGAGGAGTTGAACAAGATCGATGCTTATACAGAGACAAGAGTTGATCCTCAGGAAATCGTTGATCTTTTCAAGACACGTTTTCTGCCTCAACAGTGA 705 0.4411 MATLGVRPPPLTSTAEPPPLFDGTTRLYIDYGCPFAQRVWIARNYKGLQDKINLVPIDLRDRPVWYKEKVYPGNKVPSLEHNGKVLGESLDLIKYVDVNFEGTPLFPSDPAKKEFGEQLISHVDTFTKDLFSSLKGDPVQQASPAFEYLENALGKFDDGPFLLGQFSLVDIAYIPFVERFQIVFAEVFKHDITEGRPKLAKWIEELNKIDAYTETRVDPQEIVDLFKTRFLPQQ 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00885 234 SUPERFAMILY GST C-terminal domain-like 100 230 IPR036282 -
Cca02g00885 234 SFLD Main (cytGST) 26 207 - -
Cca02g00885 234 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 233 IPR044629 GO:0004364
Cca02g00885 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 23 104 IPR004045 -
Cca02g00885 234 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 233 - -
Cca02g00885 234 SUPERFAMILY Thioredoxin-like 16 104 IPR036249 -
Cca02g00885 234 SFLD Glutathione Transferase (cytosolic) 26 207 IPR040079 -
Cca02g00885 234 Pfam Glutathione S-transferase, C-terminal domain 139 204 - -
Cca02g00885 234 Pfam Glutathione S-transferase, N-terminal domain 27 103 IPR004045 -
Cca02g00885 234 Gene3D Glutaredoxin 2 101 - -
Cca02g00885 234 CDD GST_C_Lambda 109 227 - -
Cca02g00885 234 Gene3D - 102 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00885 Cca-Chr2 24372760 24376512 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00885 7 231 Glutathione S-transferase Gene Family AT5G02790 66.667 1.32e-115 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00885 K00799 - gmx:547597 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02331 03 44280651 44282770 Cca02g00885 02 24372760 24376512 PCT