Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00884 ATGGCAACTCTTGGCGTGCAAGCAGTTCGTCCTCCTCCATTAACGTCCACCTCCGACCCACCTCCTCTTTTTGATGGCTCCACCAGGTTGTACATCAGTTACTCTTGCCCCTATGCACAACGTGTATGGATCACTAGGAACTACAAGGGGCTACAAGACAAGATCAAATTGATCCCTATAGACCTTCAAGACAGACCAGCTTGGTACAAGGAGAAAGTCTACCCTGAAAACAAAGTGCCATCCTTGGAGCACAATGGCAAGGTATTAGGAGAAAGTCTTGATTTAATCAAATATGTAGATGCCAACTTTGAAGGGGCACATTTGGTTCCCGGAGATCCTGCCAAGCAAGAGTTCGGTGAGCAATTGATATCCCATGTTGATACATTCAACAAAGACCTTTACGCTTCACTGAAAGGGGATCCTATACAGGAAGCCAGTCCTGCTCTTGATTACTTGGAGAATGCTCTTGGTAAATTCGATGATGGGCCATTCTTGGTTGGTCAATTCAGTTTGGTGGATATTGCCTATATTCCATTTGTGGAAAGATTCCAAATTTTCTTAGCTGAGGTGTTCAAATATGACATCACAGAAGGAAGGCCTAAACTTGCAACTTGGATTGAGGAAGTGAACAAGATTGATGCTTATACACAGACAAGACTCGATCCTCAGGAAATCGTTGATAGATACAAGAAACGTTATCTGCCTCAACAGTGA 714 0.437 MATLGVQAVRPPPLTSTSDPPPLFDGSTRLYISYSCPYAQRVWITRNYKGLQDKIKLIPIDLQDRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYVDANFEGAHLVPGDPAKQEFGEQLISHVDTFNKDLYASLKGDPIQEASPALDYLENALGKFDDGPFLVGQFSLVDIAYIPFVERFQIFLAEVFKYDITEGRPKLATWIEEVNKIDAYTQTRLDPQEIVDRYKKRYLPQQ 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00884 237 Pfam Glutathione S-transferase, N-terminal domain 30 105 IPR004045 -
Cca02g00884 237 Pfam Glutathione S-transferase, C-terminal domain 143 207 - -
Cca02g00884 237 Gene3D - 105 236 - -
Cca02g00884 237 SFLD Main (cytGST) 29 210 - -
Cca02g00884 237 CDD GST_C_Lambda 112 230 - -
Cca02g00884 237 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 236 - -
Cca02g00884 237 Gene3D Glutaredoxin 1 104 - -
Cca02g00884 237 MobiDBLite consensus disorder prediction 1 21 - -
Cca02g00884 237 SUPERFAMILY Thioredoxin-like 20 107 IPR036249 -
Cca02g00884 237 SUPERFAMILY GST C-terminal domain-like 103 232 IPR036282 -
Cca02g00884 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 236 IPR044629 GO:0004364
Cca02g00884 237 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Cca02g00884 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00884 Cca-Chr2 24357908 24361736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00884 10 234 Glutathione S-transferase Gene Family AT5G02790 69.778 3.92e-121 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00884 K00799 - gmx:100775492 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02333 03 44291452 44294197 Cca02g00884 02 24357908 24361736 PCT