Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00871 ATGGAGAATAGGGTACcctcctcctcctccttcttcttcttgttctctttctcactcatgctgcaacttctcttgcacctttcttctGCCCAGATGACAGGTTTTGTAAGTTTGGACTGTGGTGGTAAAGAAAATTTCACTGATGATATTGGTATTGAATGGACTCCTGATGATAAACATAGGTTTGGAGAAATAAGCAATATATCGGTTGCCAATGAGACACGGAAGCAATACACAACACTACGATACTTTCCTGCCGATTCCAGAAAATACTGCTACACAATTGATGTTGTCAGTAGGACGAGGTACCTACTACGAGTTTCATTCTTGTACGGGAACTTTGATGCAAACAATGTCTATCCAAAATTTGACATTTCTGTTGGTGCTACTCATTGGTCGTCTATTGTTATATCCGATGCTAACACTATAGAAGCGAGAGAGCTTATATTTTTGGCATCAAGTTCTACAGTTAGTTTATGTTTATCAAATGCAACAACTGGGAAGCCATTCATATCTACACTTGAACTCCGTCAATTCAATGGTTCAGTTTATTACACATATGTTGAGGAGCAGGCTTACCTCAGTGTCTCTGCAAGGATAAATTTTGGTGCCGAAAGTGATGCCCCAATCAGGTATCCTGACGACCCATTTGATAGAATTTGGGAGTCAGATTCTGTCAAGAAAGCGAATTATCTTGTTGATGTTGCTGCCGGAACTAGGAAAATTTCCACAAACCAATCAATTGAAGTTAATAGTGATGAAATGCCACCCATGAAAGTAATGCAGACAGCTGTGGTGGGCACAAATGGATCTCTAACTTATAGGTTGAACTTGGATGGTTTTCCTGGTATTGCATGGGCATTCACCTATTTTGCTGAGATTGAAGATTTGGCTGAAAATGAGTCCAGAAAATTCAGGCTAGTACTTCCAGGTCATCCAGATATTAGTAAGGCCGTGGTAAATATTGAAGAAAATGCCCCAGGAAAATATCGTCTCTATGAACCAGGATTTACTAATTTATCTCTGCCCTTTGTTTTGAACTTTAAATTTGGCAAAACATCTGATTCTACCAGGGGCCCTCTTATAAATGCCATGGAGATTAACAAGTATTTGGAGAAAAATGATGGCTCTCCTGATGGAGAAGTTATATCTAGTGTACTTTCACACTACTCCTCAGCAGATTGGGCACAAGAAGGGGGTGACCCATGTCTACCTGTTCCATGGTCATGGGTCCGTTGTAGCTCAGATCAACAGCCAAAAATAGTTTCAATTTTGTTGTCAAATAAAAACTTGACGGGTAATATTCCTTTGGACATCACCAAATTGACTGGTTTGGTTGAACTATGGCTTAATGGAAATGAATTGACTGGCCAAATACCAGATTTCACTGGATGTATGGACTTAAAGATCATTCATCTCGAGAACAATCAGTTGACAGGTGCACTCCCAACCTCTTTGGTGAACCTCCCAAATTTGAGGGAACTGCATGTCCAAAATAATATGCTATCTGGAACTGTACCGTCGGGTCTTCTGAGCAAAGATTTGGTTTTGAACTACTCTGGAAACATTAATCTTCATAAAGGAAGCAGCAAAAAGAATCACTTGTATGTGATTATTGGGTCAGCAGTTGGGGCTTTCGTTCTACTTTTGGCCACTATTATATCTTGCTTGTTTATGCATAAAGGCAGCCTTGCTTCTCACCCTTCTCGAAGTATGGATTCTTCTAAGAACATTGGTCCTGCAGAAGTTGCTCACTGCTTCAGCCTTTCTGAAATCGAAAATTCTACAAACAATTTTCAGAAACAAATTGGTTCTGGAGGTTTTGGAGTTGTTTACTATGGGAAGCTGAAAGATGGAAATGAGATAGCAGTTAAAGTTTTAACCAGTAATTCCTATCAGGGCAAACGAGAGTTCTCCAATGAGGTGACTCTTCTCTCAAGAATACATCACAGAAACTTGGTAAAGCTTCTTGGGTATTGTAGAGAAGAAGGAAAAAGCATGCTTATATATGAGTTCATGCGTAATGGAACTCTCAAGGAACATCTTTATGGCCCATTAACACATGGACGGAGTATTGATTGGATGAAGCGTCTTGAGATTGCAGAAGATGCTGCAAAAGGGATTGAATATCTTCACGCAGGTTGTGTTCCTGCAGTCATCCATCGAGACTTAAAAAGCAGCAACATTCTTCTTGACAAAGACATGAGAGCCAAGGTTTCAGATTTTGGCCTCTCAAAACTTGCTGTGGATGGTGCTTCCCATGTTTCTAGCATAGTTCGAGGGACAGTAGGATATTTGGATCCTGAGTACTATATGTCCCAGCAGCTTACTGACAAGAGTGATATTTATAGTTTTGGCGTAATTCTTCTTGAACTCATGTCTGGTCAAGAAGCAATATCTAATGACAAATTTGGTGCTAATTGCCGAAACATAGTCCAATGGGCAAAATTACACATTGAGAATGGAGATATACAAGGTATTATTGATCCCGTGCTACAAAACAACTACGACCTTCAATCAATGTGGAAAATAGCAGAAAAAGCATTAATGTGTGTTCAACCACATGGACATATGCGACCACCAATTTCAGAAGTTCTGAAGGAGATACAAGATGCAATTGCAATTGAGAGAGAGGCCAAAGGCAATTCAGATGAGCCAAGAGATTCATTTCATTCTTCAATCAACATGGGTTCTATGGATTTGGCTGTAAATGATCACTACCACCTCTCAATTGATGAATCCATTGAACAGCCTACTGCACGGTAG 2766 0.3883 MENRVPSSSSFFFLFSFSLMLQLLLHLSSAQMTGFVSLDCGGKENFTDDIGIEWTPDDKHRFGEISNISVANETRKQYTTLRYFPADSRKYCYTIDVVSRTRYLLRVSFLYGNFDANNVYPKFDISVGATHWSSIVISDANTIEARELIFLASSSTVSLCLSNATTGKPFISTLELRQFNGSVYYTYVEEQAYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAAGTRKISTNQSIEVNSDEMPPMKVMQTAVVGTNGSLTYRLNLDGFPGIAWAFTYFAEIEDLAENESRKFRLVLPGHPDISKAVVNIEENAPGKYRLYEPGFTNLSLPFVLNFKFGKTSDSTRGPLINAMEINKYLEKNDGSPDGEVISSVLSHYSSADWAQEGGDPCLPVPWSWVRCSSDQQPKIVSILLSNKNLTGNIPLDITKLTGLVELWLNGNELTGQIPDFTGCMDLKIIHLENNQLTGALPTSLVNLPNLRELHVQNNMLSGTVPSGLLSKDLVLNYSGNINLHKGSSKKNHLYVIIGSAVGAFVLLLATIISCLFMHKGSLASHPSRSMDSSKNIGPAEVAHCFSLSEIENSTNNFQKQIGSGGFGVVYYGKLKDGNEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVKLLGYCREEGKSMLIYEFMRNGTLKEHLYGPLTHGRSIDWMKRLEIAEDAAKGIEYLHAGCVPAVIHRDLKSSNILLDKDMRAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYMSQQLTDKSDIYSFGVILLELMSGQEAISNDKFGANCRNIVQWAKLHIENGDIQGIIDPVLQNNYDLQSMWKIAEKALMCVQPHGHMRPPISEVLKEIQDAIAIEREAKGNSDEPRDSFHSSINMGSMDLAVNDHYHLSIDESIEQPTAR 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00871 921 Gene3D Phosphorylase Kinase; domain 1 571 672 - -
Cca02g00871 921 PANTHER OS07G0107800 PROTEIN-RELATED 18 883 - -
Cca02g00871 921 Gene3D - 34 178 - -
Cca02g00871 921 Gene3D - 195 370 - -
Cca02g00871 921 Gene3D Transferase(Phosphotransferase) domain 1 673 894 - -
Cca02g00871 921 Pfam Malectin-like domain 38 368 IPR024788 -
Cca02g00871 921 ProSiteProfiles Protein kinase domain profile. 597 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00871 921 SUPERFAMILY L domain-like 406 523 - -
Cca02g00871 921 ProSitePatterns Protein kinases ATP-binding region signature. 603 625 IPR017441 GO:0005524
Cca02g00871 921 SUPERFAMILY Protein kinase-like (PK-like) 573 867 IPR011009 -
Cca02g00871 921 CDD STKc_IRAK 603 870 - -
Cca02g00871 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 719 731 IPR008271 GO:0004672|GO:0006468
Cca02g00871 921 Gene3D Ribonuclease Inhibitor 382 535 IPR032675 -
Cca02g00871 921 Pfam Protein tyrosine and serine/threonine kinase 599 799 IPR001245 GO:0004672|GO:0006468
Cca02g00871 921 SMART serkin_6 597 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00871 921 PANTHER TYROSINE KINASE DOMAIN PROTEIN 18 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00871 Cca-Chr2 24074045 24081462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00871 28 707 Receptor kinase-like Gene Family AT2G37050 66.619 0.0 975
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Cca02g00871 Malectin_like 4.4e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00871 - - gmx:100798007 1635.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02342 03 44390471 44399395 Cca02g00871 02 24074045 24081462 PCT