Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00849 ATGGCCATGCCCACCAACCCTTCTTCCAACATCTCTTTCCTCCTTCTCTTCCTTCTCCTACACTTTCATTTGGGCAAAAGCGAACTTGAGGTGAATTACTACTCGAAAAGCTGCCCCAAAGCAGAAGACATCATCAAGCAACAAGTCACGCAACTATATAACAAGCATGGAAACACTGCTGTGTCGTGGGTTAGAAATCTCTTCCATGATTGCATGGTCAAGTCATGCGACGCATCACTACTTTTAGAGACGGTGCCGAATGGAGTAGTGTCGGAGAAAACGTCGTCTCGAAGTTTTGGGATGAGAAACTTCAAATACGTAAACACCATCAAAGCCGCGGTTGAACAAGAATGTCCCTCGACAGTGTCATGCGCTGACATTGTTGCTCTTTCTGCTAGAGATGGCATTGCCTTGTTGGGAGGACCAAGCATTGAAATGAAGACAGGGAGAAGGGACAGCAAAGAAAGCTATGTAACGGAGGTGGAGGACTCCATTCCAAATCACAATGATTCCATATCCTTAGTGCTGTCTCGTTTTCAAGCCATTGCCATTGACGTTGAAGCCACAGTCGCTCTTTTAGGAGCTCACTCAGTGGGAAGAGTTCACTGCGTGAATCTAGTTAAGAGACTGTACCCCACAGTGGACAAGACTCTAGACCCTACACACGCAGAGTACCTGAAGCGCCGGTGTCCAACACCGAATCCTGATCCAAAGGCTGTGATGTATTCGAGGAACGATCTGAAAACGCCCATGATCATTGACAACAACTACTACAAGAACATTTTGCAGCACAAGGGTCTTCTCTCTGTGGATGAACAATTGGCCACTGACCCAAGAACCGCACCCTATGTCCAAAAGATGGCCAACGACAACGAATATTTTCACCAACAGTTCTCAAGGGCCATTCTCTTGTTGTCGGAGACCAATCCTATTAGCGGAGATCAAGGAGAAATCAGAAAGGATTGTCGCTACCTTAATGCCAATTAG 987 0.465 MAMPTNPSSNISFLLLFLLLHFHLGKSELEVNYYSKSCPKAEDIIKQQVTQLYNKHGNTAVSWVRNLFHDCMVKSCDASLLLETVPNGVVSEKTSSRSFGMRNFKYVNTIKAAVEQECPSTVSCADIVALSARDGIALLGGPSIEMKTGRRDSKESYVTEVEDSIPNHNDSISLVLSRFQAIAIDVEATVALLGAHSVGRVHCVNLVKRLYPTVDKTLDPTHAEYLKRRCPTPNPDPKAVMYSRNDLKTPMIIDNNYYKNILQHKGLLSVDEQLATDPRTAPYVQKMANDNEYFHQQFSRAILLLSETNPISGDQGEIRKDCRYLNAN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00849 328 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 CDD secretory_peroxidase 28 323 IPR033905 GO:0004601|GO:0042744
Cca02g00849 328 PANTHER PEROXIDASE 21 15 325 - -
Cca02g00849 328 Gene3D - 32 326 - -
Cca02g00849 328 SUPERFAMILY Heme-dependent peroxidases 29 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 PANTHER PEROXIDASE 25-RELATED 15 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 Pfam Peroxidase 46 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 Gene3D Peroxidase, domain 2 166 305 - -
Cca02g00849 328 ProSiteProfiles Plant heme peroxidase family profile. 28 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g00849 328 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00849 Cca-Chr2 23674989 23677175 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00849 31 326 Peroxidase AT2G37130 75.084 6.15e-172 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00849 K00430 - gmx:100811277 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00849 02 23674989 23677175 Cca02g00849 02 23674989 23677175 ECH