Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00848 ATGTCTTCCCGAAACCCAGCGGAGGAAGAAAAGCATTGGTCCCTCCAGGACTTCGAGATCGGAAAACCTCTCGGTAGGGGCAAATTCGGCAGAGTTTACGTCGCCAGAGAACTCAAGAGCAAATTTGTTGTGGCGTTGAAGGTTATCTTTAAGGAACAAATTGACAAGTACAGAATTCATCATCAACTGAGGAGAGAGATGGAGATACAGACCGGTCTTCGGCACCCTAACATTCTGCGTCTTTATGGTTGGTTTCATGATGCTGACCGTGTTTTCTTGATTCTCGAGTATGCTCACAATGGAGAGCTTTACAAAGAGCTCAGAAAAAAAGGTCATTTCACTGAGAAGCAAGCTGCCACGTATATTTTGAGCCTCACAAGGGCGTTGGCTTATTGTCACGAGAAGAATGTCATTCATAGGGATATCAAACCCGAAAATTTGTTACTTGACCACGAGGGTCGTCTTAAAATTGCAGACTTTGGTTGGTCTGTTCAGTCCAAAAGTAAAAGACATACCATGTGTGGAACATTGGATTATTTAGCACCGGAAATGGTTGAAAACAAAGCTCATGACTATGCAGTTGATAATTGGACTCTGGGTATTCTTTGTTACGAGTTCCTCTATGGTGCTCCTCCATTTGAGGCTGAGAGTCAAGCTGATACCTTCAAAAGGATAATGAAGGTTGACCTAAGCTTCCCTGCCACCCCTTCTGTTTCTTTGGATGCTAGACATCTGATTAGTCGGCTCCTGGTGAAAGACTCTTCACGAAGGCTCTCACTTCAGAAGATAATGGAGCATCCTTGGATAATTAATAATGCAGATTTTATGGGTATCTGCAAGCAGTAG 846 0.435 MSSRNPAEEEKHWSLQDFEIGKPLGRGKFGRVYVARELKSKFVVALKVIFKEQIDKYRIHHQLRREMEIQTGLRHPNILRLYGWFHDADRVFLILEYAHNGELYKELRKKGHFTEKQAATYILSLTRALAYCHEKNVIHRDIKPENLLLDHEGRLKIADFGWSVQSKSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGAPPFEAESQADTFKRIMKVDLSFPATPSVSLDARHLISRLLVKDSSRRLSLQKIMEHPWIINNADFMGICKQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00848 281 ProSiteProfiles Protein kinase domain profile. 18 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00848 281 CDD STKc_Aurora 17 269 - -
Cca02g00848 281 SUPERFAMILY Protein kinase-like (PK-like) 10 272 IPR011009 -
Cca02g00848 281 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
Cca02g00848 281 PIRSF ILK 1 272 - -
Cca02g00848 281 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Cca02g00848 281 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 3 279 IPR030616 GO:0004672
Cca02g00848 281 SMART serkin_6 18 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00848 281 Gene3D Transferase(Phosphotransferase) domain 1 101 277 - -
Cca02g00848 281 Pfam Protein kinase domain 18 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00848 281 Gene3D Phosphorylase Kinase; domain 1 5 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00848 Cca-Chr2 23635010 23637914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00848 8 272 CBL-interacting serine-threonine protein kinases AT5G10930 40.074 6.08e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Cca02g00848 Pkinase 8.5e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00848 K08850 - gmx:100800111 535.798