Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00844 ATGAGCGTCATCGACATTCTTACCAGAGTTGACTCCATTTGCAAGAAGTACGACAAATACGACGTCGAAAAGCAGAGGGACTCCAATATCTCCGGCGATGATGCCTTCGCCAGACTCTACGCCTCCGTCGACTCCGACATCGAGGCCCTAATTCAGAAAGCAGAAACCGCTTCCAAGGAGAAAGGTAAGGCATCTGCTGTAGCCATCAATGCCGAGATTCGTCGTACCAAGGCTCGGTTGCTGGAGGAGGTTCCCAAATTGCAGAGATTGGCTGTGAAAAAGGTAAAGGGGCTTTCATCACAAGAATTTGCTGCCCGTAATGATTTGGTTCTTGCATTGCCGGATAGAATTCAAGCTATCCCAGATGGGACTCCTCCTGCACCAAAACAATCTGGAGGCTGGGCAGCTTCTGCCTCACGTCCTGAAATTAAGTTTGATTCAGATGGGCGATTTGATGATGAATACTTCCAACAAACTGAGCAATCCAGTCAGTTTAGGCAGGAATATGAAATGCGTAGAATTAAACAGGATCAAGGTTTGGATGTGATTGCTGAAGGATTGGATACATTGAAAAACATGGCACATGATATGAATGAGGAAATGGACAGACAAGTTCCACTGATGGATGAGATTGACACTAAGGTGGACAAGGCATCCTCTGACCTTAAGAATACAAATGTTAGACTTAAAGACACAGTGAACCAGCTTCGATCCAGTCGAAACTTCTGTATCGATATTGTTTTGTTGATCATAATTTTGGGAATTGCTGCCTACTTATACAATGTACTAAAGAAATGA 798 0.4424 MSVIDILTRVDSICKKYDKYDVEKQRDSNISGDDAFARLYASVDSDIEALIQKAETASKEKGKASAVAINAEIRRTKARLLEEVPKLQRLAVKKVKGLSSQEFAARNDLVLALPDRIQAIPDGTPPAPKQSGGWAASASRPEIKFDSDGRFDDEYFQQTEQSSQFRQEYEMRRIKQDQGLDVIAEGLDTLKNMAHDMNEEMDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00844 265 Gene3D - 170 231 - -
Cca02g00844 265 CDD SNARE_Qc 175 230 - -
Cca02g00844 265 PANTHER SYNTAXIN-73 1 261 - -
Cca02g00844 265 PANTHER SYNTAXIN 1 261 IPR045242 -
Cca02g00844 265 SUPERFAMILY SNARE fusion complex 163 230 - -
Cca02g00844 265 Pfam SNARE domain 207 256 IPR000727 -
Cca02g00844 265 MobiDBLite consensus disorder prediction 120 140 - -
Cca02g00844 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00844 Cca-Chr2 23560790 23564381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00844 1 264 SNARE and Associated Proteins AT3G09740 78.195 5.87e-158 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00844 K08506 - gmx:100819272 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00844 02 23560790 23564381 Cca02g00844 02 23560790 23564381 ECH