Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca02g00804 | ATGGATGGTGACGACGATCCTTCAGCACTTGCATGGCTTTGGGTCGTTGAAGCCCTATCAGCCTGCAAAAAAATCTCTCCTCCCACTTTACAGCGTATGATTAATTCAGGCCCTGTGAAGGATGAGAAATTAAGTGAAACCACAAGGGAATTGGTTGCTCTGAGGTGTTTGGAGGAAGTGTCTGCTTGTGTGGTTGACACTGACGCTTCTTCTACCGTGGATTCCAGAGTTGGATTCGATTTTTCGCGTGGTTGTGAAGATGTCCTCCAAGAAACATTGGGTGAGTTAATCCCATTATCAAAACTGAAAATGGCTGGAGCAGAGCTTTTGAAATGGGATGTTCAGCCATTTGTTAAGCACAAAAGAGCTGACACTTTTAAATGTCACTTAGAGCAGCTGAGAGAATCGATCTTGGAAGGTACTCATCCACATACTGATTACATGAAAGAAAGAAGTGGGTTATTTCCTCAGAATGGAAGTTATACAGTGGCTGTAAGTGACGAAAAATATGATCATTCAGATAAGGATGCGGGGAACTCCACTGTTGCAAAAAATATGGGAGAAAAAGAGAACTCAGTGTCCTTAATTTTAGGTGACGGGAATAAATCTTCAAAAGAACACATGCTTGATAATAATTTTTTGCCATCTAAGAGTAGGGTTCACTCAGCTGATGATCATCTTACAAGACACCGTGGAAAGCAAGTTTGTATAAATGAATGTGATGATTTCTTTAGAAATTCAAAGAGGATTAAATGTTATGCATATACAAGTTTTGATTCTAAGAAAGAAAAACCAGTTTCTCAACTCAGACAGGAAGCTTCAGAACAATTAACTGAAAGAATTCTTCCAAGTTCTGAGCAAGGAAAGCATCATGCTGACAACAATAACATGGAAATTCTGGGTGATGTGTCCTCAGAGGATAGTCACAATAAATGTACTGCTTCAAAATTGTGCCAATCCAGCAGCCATATTGAAGTCTTTCATGATGAATCAAATATTCCTTTTAATGATACTTTGATGCTTCAACATTCATTTGGAGGCGAAAATTTTCAGCAACGGCAGGTTGAGTCAATTTCATATATTGCACTTCCAGATAGAATCCAGCATAAGATTTCTGGAACTAAACCCTGGTCTAAACAGGAAACAGATTTACAACTCGAAGATCCTAATGGCTCACTGCGGCAAAGTGCTAGTGTTAAAGCTCCAGATCATACCGAGAATAGTTGTGGGGTAGAGATATCGGGTGCTATTGTTTATCAAGGTGAAAAGATTAACCTTGTGATAGAAAAGAAGGCAGATCAAAATCTTTGTTTGAAGTGTAATGAAGGTGATCAATTACTGATTTGTGATGCAAATGTTGTCCAACCAGTGGTTCCTGAAAATTGTCTTGGTATGACAACCACCATTATGCCTCAGCACACCTATGTAGCTGAACCTTGCAATAATACATCAATGGATGAAACTGATGGCACTGCACATCATGCCATTCCAACAAATGATTCTAATGCAGAAAAAAATCAGCATATGATTAATTTACACCAACCTAAACAAAAGGAACCAGATATTCGACCTTTAAATCTCTCTCAGAAGCCAGTTGCTAGTGATAAAACTAAAGTTGATATGGTTAATGAATGTGGAGCAGAGTTATCAAGTGATGGTGATGGATATCACAATGAAAAAAATTATTTTGAAGCAAGGACTGAATCAAATGAACAAAATCTTTGCATGAAGTGTAATGAAGGTGGCCAATTACTGGCTTGTAAGAAAACTACTTGCCCATTGATGGTGCATAAAAACTGTCTAGGTGCATCTGCTCAGTTGGATGCAAAGGGCAACTTTTTTTGCCCATTTTGTGCATATTCTCAAGCTATTTCAGAATATCTTGAAGCCAAGAAAAATGCTTCCTTTGCAAGGGAAGAATTAGCCATATTCATTAGTAAAGGTATACAAAATCAAGCTGCAGAACTTGTTTATGATTTTCAAAGACAAGAACATTGTTTTTCAAGAAAGAGTAGCAAGTGTGAACATAGTCATGTCAAAGACAACGAAAATGACCAGTTAACAGGGTATGAAGGCAATAGAGAAGATCAGGATGGTGGGCATCCAAATGAAGCAAATAATCTTCAGTTTGAAAAATGTCATCAACAAGCTCCTATACCATGCATTCATTCATCATGCAGAGAAAAGGAAAATGTAAATAATGGATATGATAAAGTTTTAAGAGAAGAGGAAATAGGTGAAATGCCAAATGCAAAGAGCTTAACTGGTGGAAGAGTTGAAGAAACTGAAGTGTCAACTGATCATGTAGATAGACATGTTGGTGATAAATTTACTTGTGAAAAAACAAATATTGCTCCTGTTAATAAAAGCAATGCTGGAGAAGTTCCGCAAGAAATGATTAAACAGCACAATATTGATGGAACAATAGAGCCTGTCCGTGCACATGATACTGGAAAAGAGGAAATTTCTGAACATGAATGTGAAACGCATAGTATTCCTAGATACACCATGAGATTCCGTGAACATGTAACACAATGCAAACCCCAAGCAAGCCCGGTATTTCATTGTAGTCAGTTTAGACGAAGGAAAATTCCATGGACAGCTGAGGAGGAAGAGCTGATAAGGGAGGGAGTGAAGAAGTTTGGGTTGAATGACCCAAAGAAATGGAACAAAATTTTAGCATTCGGTTCTTGTGTGTTTGAGATGACTGGTAAGCGTCGGACATCACAAGACCTAAAGGATAAATGGAAGAACATGTGCAAAGCTCACTCAAAATCAAAATGA | 2784 | 0.3807 | MDGDDDPSALAWLWVVEALSACKKISPPTLQRMINSGPVKDEKLSETTRELVALRCLEEVSACVVDTDASSTVDSRVGFDFSRGCEDVLQETLGELIPLSKLKMAGAELLKWDVQPFVKHKRADTFKCHLEQLRESILEGTHPHTDYMKERSGLFPQNGSYTVAVSDEKYDHSDKDAGNSTVAKNMGEKENSVSLILGDGNKSSKEHMLDNNFLPSKSRVHSADDHLTRHRGKQVCINECDDFFRNSKRIKCYAYTSFDSKKEKPVSQLRQEASEQLTERILPSSEQGKHHADNNNMEILGDVSSEDSHNKCTASKLCQSSSHIEVFHDESNIPFNDTLMLQHSFGGENFQQRQVESISYIALPDRIQHKISGTKPWSKQETDLQLEDPNGSLRQSASVKAPDHTENSCGVEISGAIVYQGEKINLVIEKKADQNLCLKCNEGDQLLICDANVVQPVVPENCLGMTTTIMPQHTYVAEPCNNTSMDETDGTAHHAIPTNDSNAEKNQHMINLHQPKQKEPDIRPLNLSQKPVASDKTKVDMVNECGAELSSDGDGYHNEKNYFEARTESNEQNLCMKCNEGGQLLACKKTTCPLMVHKNCLGASAQLDAKGNFFCPFCAYSQAISEYLEAKKNASFAREELAIFISKGIQNQAAELVYDFQRQEHCFSRKSSKCEHSHVKDNENDQLTGYEGNREDQDGGHPNEANNLQFEKCHQQAPIPCIHSSCREKENVNNGYDKVLREEEIGEMPNAKSLTGGRVEETEVSTDHVDRHVGDKFTCEKTNIAPVNKSNAGEVPQEMIKQHNIDGTIEPVRAHDTGKEEISEHECETHSIPRYTMRFREHVTQCKPQASPVFHCSQFRRRKIPWTAEEEELIREGVKKFGLNDPKKWNKILAFGSCVFEMTGKRRTSQDLKDKWKNMCKAHSKSK | 927 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca02g00804 | 927 | Pfam | Myb-like DNA-binding domain | 865 | 918 | IPR001005 | - | |
Cca02g00804 | 927 | SMART | sant | 862 | 922 | IPR001005 | - | |
Cca02g00804 | 927 | SMART | PHD_3 | 574 | 619 | IPR001965 | - | |
Cca02g00804 | 927 | MobiDBLite | consensus disorder prediction | 373 | 403 | - | - | |
Cca02g00804 | 927 | Gene3D | - | 856 | 923 | - | - | |
Cca02g00804 | 927 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 9 | 467 | - | - | |
Cca02g00804 | 927 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 472 | 922 | - | - | |
Cca02g00804 | 927 | ProSiteProfiles | Zinc finger PHD-type profile. | 572 | 621 | IPR019787 | - | |
Cca02g00804 | 927 | SUPERFAMILY | Homeodomain-like | 860 | 921 | IPR009057 | - | |
Cca02g00804 | 927 | SUPERFAMILY | FYVE/PHD zinc finger | 566 | 622 | IPR011011 | - | |
Cca02g00804 | 927 | ProSitePatterns | Zinc finger PHD-type signature. | 575 | 618 | IPR019786 | - | |
Cca02g00804 | 927 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 566 | 628 | IPR013083 | - | |
Cca02g00804 | 927 | MobiDBLite | consensus disorder prediction | 677 | 701 | - | - | |
Cca02g00804 | 927 | MobiDBLite | consensus disorder prediction | 677 | 706 | - | - | |
Cca02g00804 | 927 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 858 | 924 | IPR017930 | - | |
Cca02g00804 | 927 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 472 | 922 | - | - | |
Cca02g00804 | 927 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 9 | 467 | - | - | |
Cca02g00804 | 927 | MobiDBLite | consensus disorder prediction | 372 | 406 | - | - | |
Cca02g00804 | 927 | CDD | SANT_TRF | 864 | 921 | - | - | |
Cca02g00804 | 927 | ProSiteProfiles | Myb-like domain profile. | 858 | 920 | IPR001005 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca02g00804 | 862 | 922 | Single Myb Histone (SMH) Gene Family | AT1G17520 | 42.623 | 1.08e-06 | 49.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Cca02g00804 | Myb_DNA-binding | 3.2e-08 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca02g00804 | - | - | ccaj:109810464 | 1914.04 |