Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00791 ATGGGCCCATCCATGTTGAGCAACCAAGCCATGCCGAATATATGGAACAAAATATCAGAGGCACGTTACTCAAAACGCAGAACATATAACCGAAGAACCCTAAATTCAATACAAGTTGAAAACCTAAATCCAAGGGTGAAATTTGCTCAAGGAAGTGAATTTCATTCAATCCAAATGGAAGAAGTTCCAGAACAAGGACTCATTACGAGTCCAAATCAAACCGGGGAGGTTGCTTCCACAATCGAGGATGAAGTAAATGAACCAATAAAGAAAAAAAGATATCGTAAACCGAATGAGAAGAAAAACAGCTCTAAGTTTCGGGGAGTTACCATGTGTAAGGGACGTTTTGAATCGTTTGTGTGGTACAACGATCGGAAAACAACAGGAAAGAAAGGAAAGACAGGTGGATTTAAGACTGAGGAGGAAGCAGCCAAAGCCCACGATTTGATTGCCATTAAGATATGGGGCGATTATGCATTTACAAATTTTCCAGAGGAAAACTATGATAAGCAACTCTCAGAGTGGAAACACTTGGACTATAGAGATTGTATTCTTGAGATAAGAAAGAGGATTGGGAAAGAGAAAGACAATTCAACGATAGGATCTGATGACCTTAACATCTCCAGAAACATAGAAGGAACCGTTTCAAGTTCGGCAATGGCACAAACATCTAATGATACTCTTTCAACTGAAAGAGACATTAAAGCATGTGAACCCTCTACAAATTCCCATAACAACAACACATTAGAGCAGCACAATAATCGTGATGGATTGGAAAAACATGTGTTCATCTCACCCCCTTTTGATGGCCAACAAAACCATGATGGATCCATTAATGCTGTTGCTGAAGCAACAACAGTTGAAATGGAAGAACACAATGCAGATGATGAAACATTCCCAAACCAAAACTCCACCATAGTACAGTCAATGTTGCAAGAGAATGGTCAAGAATCCGATTCTCCAGCAACATGGCAAAACCTACATGGGGGTGTTAATGAGAGCCTTTTTGGAGATCAGTTTATGTATGATTTTGATAAAGACTCATGGCTAGGTCTTGAATGTCAAGATAACCCAAGTTTCCAAAATGGTCAAAATTCCCCTCTTTGGTCATTTGATTATGGAAGTGATTCAGTTGGGTTTCATACACAAACTTTAGGCAATGATAATGCCCTAAATTGGGGGCATTCAGGTTCAATTTCTCATACGGGTAATGTAAATCCAATAGAAGCACAAAATGGTGGTGTTGGTTCAGTTGGGATTAGCTCTACAGGGTTGCATCCAGTGGTTCCAAATATTCAGCAATCTGAAGCAACAAACCTAATTCACCAAAGGTATGAACCTTTCCAACCTTGCTCTGAAGCAAAAAGTAGTTCTCCAGAGAAGATTGTTGACAATGATTTGGACATAAGCGATTATCTGAATCTCAACAACCCTGACATGGATGACACAAATTGGGATCAGTATACGAACCAACTTTGGTCAAAATCAGAGGCTAAGAGAGGTGACTAG 1509 0.397 MGPSMLSNQAMPNIWNKISEARYSKRRTYNRRTLNSIQVENLNPRVKFAQGSEFHSIQMEEVPEQGLITSPNQTGEVASTIEDEVNEPIKKKRYRKPNEKKNSSKFRGVTMCKGRFESFVWYNDRKTTGKKGKTGGFKTEEEAAKAHDLIAIKIWGDYAFTNFPEENYDKQLSEWKHLDYRDCILEIRKRIGKEKDNSTIGSDDLNISRNIEGTVSSSAMAQTSNDTLSTERDIKACEPSTNSHNNNTLEQHNNRDGLEKHVFISPPFDGQQNHDGSINAVAEATTVEMEEHNADDETFPNQNSTIVQSMLQENGQESDSPATWQNLHGGVNESLFGDQFMYDFDKDSWLGLECQDNPSFQNGQNSPLWSFDYGSDSVGFHTQTLGNDNALNWGHSGSISHTGNVNPIEAQNGGVGSVGISSTGLHPVVPNIQQSEATNLIHQRYEPFQPCSEAKSSSPEKIVDNDLDISDYLNLNNPDMDDTNWDQYTNQLWSKSEAKRGD 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00791 502 ProSiteProfiles AP2/ERF domain profile. 105 164 IPR001471 GO:0003700|GO:0006355
Cca02g00791 502 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL7 64 189 - -
Cca02g00791 502 SMART rav1_2 105 170 IPR001471 GO:0003700|GO:0006355
Cca02g00791 502 SUPERFAMILY DNA-binding domain 104 165 IPR016177 GO:0003677
Cca02g00791 502 Gene3D AP2/ERF domain 104 165 IPR036955 GO:0003700|GO:0006355
Cca02g00791 502 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 64 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00791 Cca-Chr2 21202081 21207028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00791 97 190 AP2-EREBP Transcription Factor Family AT5G57390 37.037 1.20e-14 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Cca02g00791 AP2 6.4e-05 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00791 - K09285 ccaj:109804985 585.874